Gene
RNA
| Item | Value |
|---|---|
| gene id | G121061 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20170201 ~ 20170409 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109523355 isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139797 | True | 209 | lncRNA | 0.59 | 1 | 20170201 | 20170409 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537330 | fam131b | coding | downstream | 38320 | 20094421 ~ 20131881 (-) |
| LOC110537306 | LOC106605737 | coding | downstream | 163358 | 20001127 ~ 20006843 (-) |
| gstk1 | gstk1 | coding | downstream | 172980 | 19987402 ~ 19997221 (-) |
| LOC110534384 | LOC106605832 | coding | downstream | 182921 | 19975980 ~ 19987280 (-) |
| LOC110534373 | LOC106605835 | coding | downstream | 226824 | 19929534 ~ 19943377 (-) |
| LOC110509570 | LOC106575203 | coding | upstream | 142217 | 20312626 ~ 20318150 (-) |
| lag-3 | lag-3 | coding | upstream | 183705 | 20354114 ~ 20356998 (-) |
| tapbpl | LOC100136300 | coding | upstream | 201696 | 20372105 ~ 20377151 (-) |
| LOC110503568 | c1r/c1s | coding | upstream | 221568 | 20391977 ~ 20399493 (-) |
| LOC118936525 | LOC106605721 | coding | upstream | 243090 | 20413499 ~ 20420924 (-) |
| G121048 | NA | non-coding | downstream | 13818 | 20146188 ~ 20156383 (-) |
| G121036 | NA | non-coding | downstream | 36515 | 20133422 ~ 20133686 (-) |
| G121030 | NA | non-coding | downstream | 43862 | 20121473 ~ 20126339 (-) |
| G121005 | NA | non-coding | downstream | 93956 | 20069603 ~ 20076245 (-) |
| G120997 | NA | non-coding | downstream | 117029 | 20052654 ~ 20053172 (-) |
| G121064 | NA | non-coding | upstream | 4324 | 20174733 ~ 20175077 (-) |
| G121086 | NA | non-coding | upstream | 39023 | 20209432 ~ 20209636 (-) |
| G121087 | NA | non-coding | upstream | 39747 | 20210156 ~ 20210436 (-) |
| G121044 | LOC100135813 | non-coding | upstream | 43403 | 20213812 ~ 20249299 (-) |
| G121093 | NA | non-coding | upstream | 51927 | 20222336 ~ 20223686 (-) |
| LOC110537275 | grl1 | other | downstream | 241741 | 19924063 ~ 19928533 (-) |
| LOC118944062 | LOC106575151 | other | downstream | 474637 | 19692971 ~ 19695564 (-) |
| cacng6b | LOC106606119 | other | downstream | 681969 | 19484328 ~ 19499142 (-) |
| G119663 | NA | other | downstream | 1121171 | 19048307 ~ 19049030 (-) |
| G119512 | LOC105019016 | other | downstream | 1368814 | 18799500 ~ 18801387 (-) |
| G121046 | NA | other | upstream | 40659 | 20211068 ~ 20212367 (-) |
| LOC110509624 | ret1 | other | upstream | 292273 | 20462682 ~ 20465854 (-) |
| G121188 | NA | other | upstream | 328487 | 20498896 ~ 20500587 (-) |
| G121208 | NA | other | upstream | 456148 | 20626557 ~ 20627700 (-) |
| G121421 | LOC106576258 | other | upstream | 886189 | 21056598 ~ 21058849 (-) |
