G120184


Basic Information

Item Value
gene id G120184
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 20211456 ~ 20212371 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138686
gcttacttatagaccttactgtgaaatgcttacttataggcccttaaccaacagtgtagaccttactgtgaaatgcttacttataggcccttaaccaacagtgtagaccttactgtgaaatgcttacttataggcccttaaccaacagtgcagttcaagaagagttaagaaaaatatttaccaaatggactaaagttaaaaaatatatatatattcaaagtAACACcgtaagaataacaataacgaggctatatacagggtatacaGGTACCattaccgagtcagtgtgtggggttacaggttgaggtaatttgtacatgtaagtaggggtgaagtgactatccATAGATAAACGAGTAGTAGCAgtgaaaaaaagggggggggggttgattttattgattgttcagcagtcttatagcttgggggtagaagctgatgaggagccttttggtcctagacttggtgctccggtactgcttgccgtgcggtagcagagagaagtctataacttgggtgactggagtctctgacaatttcaTGGTCTTTCCTCTGACtctgtctggtatagaggtcctggatggcaggaagtttggctccagtaatgtactgggccgttccccctaacctctgtagcgccttaaggtcagatgccgagcagttgccatacttggcagtgatgcaaccggtcaggatgatctcgacggtgcagctgtagaactttttgaggatctggggtaccatgtcaaatgttttcagtctcctaagggggagaaggttttgtcgtgccctcttcacgactgtcttggtgtgtggaccatgatagtttgttggtgatgtggacgccaaggaacttgaagctctcgacccgctccgctacagccccgttgatgttaatgggggcctgttcgggacgctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138686 True 916 lncRNA 0.46 1 20211456 20212371

Neighbor

gene id symbol gene type direction distance location
LOC118944184 NA coding upstream 2305 20208863 ~ 20209151 (+)
LOC118944180 NA coding upstream 5424 20205740 ~ 20206032 (+)
LOC118944182 NA coding upstream 6326 20204830 ~ 20205130 (+)
LOC118944183 NA coding upstream 8245 20202903 ~ 20203211 (+)
LOC110537365 LOC106605735 coding upstream 10424 20197023 ~ 20201032 (+)
cnp-1-2 cnp-1-2 coding downstream 15250 20227621 ~ 20232215 (+)
LOC100329212 LOC100135813 coding downstream 31059 20243430 ~ 20249298 (+)
opn9 LOC106576962 coding downstream 37918 20250289 ~ 20259650 (+)
LOC110537377 LOC106576644 coding downstream 47444 20259815 ~ 20297138 (+)
LOC110509548 LOC106575195 coding downstream 86115 20298486 ~ 20310775 (+)
LOC110537348 LOC106575899 non-coding upstream 26042 20179254 ~ 20185414 (+)
G120213 NA non-coding upstream 36969 20173740 ~ 20174487 (+)
G120212 NA non-coding upstream 39011 20172049 ~ 20172445 (+)
G120210 NA non-coding upstream 40700 20170545 ~ 20170756 (+)
G120209 NA non-coding upstream 41338 20169800 ~ 20170118 (+)
LOC110534400 ncapd2 non-coding downstream 3847 20202143 ~ 20228607 (+)
G120238 NA non-coding downstream 56127 20268498 ~ 20270723 (+)
G120254 NA non-coding downstream 100029 20312400 ~ 20312765 (+)
G120188 NA non-coding downstream 112731 20325102 ~ 20326230 (+)
G120263 NA non-coding downstream 128603 20340974 ~ 20341290 (+)
G120211 NA other upstream 40075 20171082 ~ 20171381 (+)
zyx zyx other upstream 54346 20145710 ~ 20165887 (+)
casp2 LOC106605831 other upstream 186473 20018602 ~ 20030933 (+)
G120059 grl1 other upstream 282979 19924072 ~ 19928477 (+)
G120259 NA other downstream 107368 20319739 ~ 20320256 (+)
G120169 NA other downstream 195491 20407862 ~ 20419128 (+)
erfl3 LOC106576393 other downstream 687903 20900204 ~ 20977481 (+)
LOC110509768 LOC106576258 other downstream 779383 20990131 ~ 21058856 (+)
LOC118938333 LOC106605563 other downstream 1329726 21532987 ~ 21547038 (+)

Expression

G120184 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

G120184 Expression in each Bioproject

Bar chart with 18 bars.
G120184 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network