XLOC_020997 (aox5)


Basic Information

Item Value
gene id XLOC_020997
gene name aox5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 14083729 ~ 14115316 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041291
GAACTTGTCTTCTACATCAATGGCAAAAAGATCGTGGAGAAGAATGCTGATCCAGAAGAGATGTTACTGGCTTACCTCAGAAGGAAAGTCGGTCTAACGGGCGCAAAATATGGCTGTGGTGGAGGGGGGTGTGGAGCCTGCACTGTGATGGTGTCCAGATATGACCCTCTCCAGGACACCGTGCTTCACTGGTCGGTGAATGCCTGTCTTCAGCCGATTTGTTCTCTGCATGGTGCGGCAGTGGTGACCGTAGAGGGCATCGGAAGCACCAAGACAAAACTACATCCAGTTCAGGAGCGTATAGTAAAGGCTCATGGGTCTCAGTGTGGCTTCTGTACTCCTGGGATGGTGATGTCCATGTATACATTACTGAGAAACAACCCACATCCCACCATTGAGGACATTCGAGAGACACTGGGAGGGAACCTGTGTCGTTGTACGGGATATCGACCAATAATCGAtggatttaaaacattttgtgaaATATCTGGAGAACTTTTCATCATGGATAATGTCTTACCCCTGGACCCAACTCAAGATCTGATCTTTCCACCAGAGTTACTGATTATGGGAAAGAAAAAAGCAGAACGACATTGTTTCCAGGGTGAAAAGGTCAGGTGGATTTCACCATCAGATCTAAAAGATTTAATCAAGCTGAAAGCTGAACACTCTGACGCACCTCTGTTGGTTGGAAACACAACCATAGGCATAACTGTAGGGGCAGGATGCAGTTTGTCTGTTTTGAAGGATGTTCTTCAGCAAAGAATTGAGGATCTTGGACCAGAGAAGAGCAGGGTTTACCAGGCTCTCGTTCAGACACTGCAGTGTTTGGCCGGCAAACAGATTCGTAACATGGCTACCATTGGTGGAAATATCCTGAGTGCCAACCCCAAGTATGACCTGAGCAGCATTTTAGCAGCAGCTGAGTGTACGCTACACATTGCTTCAAAAGATGGTGATCGAGAGATTTGTCTAAGTgaggagtttttcacagactttggAAAAACAGCTCTACGACCTGAGGAGATTCTGCTGGCTATTGACATTCCTCATTCAAAGCCGTGGGAGTTTGTGTCCGCATTTCGCCAGGCACAGCGCAGAGAGTTCGCTTTCTCCATAGTGAATGCTGGTATGAGAGTGGCATTCAGACATGATTCAAATGTGGTGGAGCATCTGGATATTTTTTATGGAGGCGTGGGTTGCACTCTGGTAAAAGCCAGACACACCTGTAAGGAACTGATTGGAAGAAAATGGGATGAGAAACTTCTGGCAGAGGGAACACAGCTCTTAGAAGAAGAAATCTCGGTACCCGCTACTGTCCCTGGTGGACGGGAAGAATATCGCAAAGCTCTAGTGCTCAGTTTCTTTTTCAAGTTTTACATGCAAGTGTTGCTGGAGCTTCAACAAAGGCTTGTACCAGAGACTCAGTCCTCTAGTGACCCAGTAGGACGTCCCAACGTACACCTGGCAGCGCTCCAGCAGGCTACAGGAGAAGCTGTGTATTATGATGACATCCCATCTGTTAAAGGAGAACTGTTTGTTTCCATGGTAACCAGCACCCGGGCTCATGCAAAGATCATCTCTATAGATGCATCAGTGGCTCTAGCTATGCCTGGAGTGGTTGACTTCATCTCTGCTAAGGATGTTCCTGGGCAGAATCGAAGACTCTGGTTCAACAATCCTGAGGAACTTTTTGCAGAAGAGGAGGTCATTTGTGTGGGGCAGATTATTGGTGCGATTGTAGCTGAGACTAGAGAACAAGCTAAACGAGCAGCTCAGCAAGTAGACATTACTTACCAGGATATGCAACCTGTCTTTTTCACAATTGAGgAGGCTATTGAACACGAGTCATTTTTTGACCCCAAGAGAAAGCTGGAAAGAGGAAATGTGGAAGAAGGTTTTGCAAAGGCAGACCAAATTCTAGAGGGTGAGATGTATATGGGTGGCCAGGAACACTTCTACATGGAAACTCAGGGAGTGATTGCAATTCCTACAGGAGAAGCAAGTGAAATTGAGCTATATGTTGCCAGTCAGCATGCAGCTTACACTCAGgAAGTGGTGGGAATCACTCTCGGCATTGACTCCAACAAGATCACGTGTCATGTAAAGAGGCTGGGAGGTGGTTTTGGTGGTAAAGTCATGAAGATTGCATCATTATCTGCTATCGCTGCTACGGCTGCCATAAAGACTGGCCATGCTGTGCGATGTGTACTAGAACGTGGAGATGACATGCTCATCACCAGTGGAAGATCTCCTTTCTTGGGGAGGTACAAGATTGGCTATATGAATGACGGAACAATCCTGGCTGCTGATATCACATACTACAGTAATGGAGGATGCACTCTTGATGAATCCTCTTTTATTATGGAGAAAGCTCTTCTTCACATGGATAATGGCTACAAGATCCCTAATCTACGTGGACGTGGACTGGTGTGCAAGACCTTCTTACCTTCATACACAGCCTTCCGTGGATTTGGTGGACCTCAAGGGTTGACCATTATTGAGAGTGTGCTACATGAGGTGGCGGTCAAGTGTGGCCTACCTGCACATCAGGTAAGAGACATCAATTTGTACAAGGAGGAGAAATGCTTTACCCACCACAAGCAGCTGTTTTCCCCTCATGATATGGTGCGCTGCTGGAACGAGTGTCTAGAGAAGTCCAACTACACCCAACGATGCCAGTACATCGAGCAGTTTAACGGCCACAACCATTGGAAGAAGCGAGGGATTTCCATTGTCCCTATAAAGTTTGGAATCGGATTCTCGAAGGGCTTCTATAACCAGGGAGCAGCATTGGTGAACGTCTACAAAGATGGATCAGTTGTGATTTCTCATGGAGGAACTGAGATGGGTCAAGGTATCAACACCAAAGCCATACAGATTGCAAGCCGCATTCTGAAGGTTTCAATGTCCTCGATCCACATCAAAGAGACTTGTACTGGAAATGTGCCCAATGCTGCACCATCCGCGGCATCTTTCGGCACAGATGCTGTTGGGATGGCGGTCAAGaATGGTTGTGAGAAACTAATGAGACGTCTAGAGCCACTCATTAAGAAACATCCCCAATACACATGGCAACAACTGGTGGTGGAAGCTTACTGCCAGAAGATTAGTTTGTCAGCAACTGGTTTCTTTATGGGCCCCCACACCAGCGTTGACTGGGAGAAGAGTGAGGGCAATGCGTACTATTACTTTACTTTTGGGGCCTGTTGCTCAGAGGTGGAAATTGATTGCTTGACAGGAGATCACAAGAACATTAGGACTGACATTGTGATGGATGTTGGTCGGAGCATAAATCCTGCTTTGGACGTCGGACAGGTTGAGGGTGGTTTTGTCCAGGGCATTGGACTCTATACTATAGAGGAGTTGCAGTTTTCTCCGCAGGGTGTTTTGTTGACCAGAGGACCCTCGCAGTACAAAATTCCAGCTCTGTGTGACGTCCCTCCTCAAATTAATGTCCATCTCCTGAGAAATGCTGACAATCCTCATGCCATCTACTCCTCAAAGGGCATTGGAGAACCCCCAGTATTTTTTGGCTGTACTTTATTCTTCGCCATTAAAGAAGCGATTGCCGCCGCACGGAAAGAGAGAGGCCTGAGCGAAAGTTTCTCTTTCTCTTCTCCTGCCACTGCAGAGAAGATACGCATGGCCTGTGAAGACTGCTTCACCAGAATGATTCCACAAGACAAGAAAGTAAAAACCAAACCGTGGGCCATCAACGTGTGAAGAAAAACATATCAGATCATTATCAGCTTTATTACCTCACACAAACAAGCTGACACATCATTTTCATTGAGACTTTGACCTGTTGCTAGTTATAAACCATCAACCTTTAAAGCCTTTAGCTTGTCCAGAACTATATGTTCTAGCATCCTTAATATATGTTATTATGCAGTTAAACAATATGTAATGTGCTTGAATAACCATTAGCAGGAAGTAAAATAACTAAATTCACATTTTATTATGATATATAAAGTGAACTTATGCATGTGAGATGATATTAAAGAGTGTTGATAATAAACTtgaataatta
>TCONS_00041292
ATGTCTTCTCTATCTGTGAACAGTGAACTTGTCTTCTACATCAATGGCAAAAAGATCGTGGAGAAGAATGCTGATCCAGAAGAGATGTTACTGGCTTACCTCAGAAGGAAAGTCGGTCTAACGGGCGCAAAATATGGCTGTGGTGGAGGGGGGTGTGGAGCCTGCACTGTGATGGTGTCCAGATATGACCCTCTCCAGGACACCGTGCTTCACTGGTCGGTGAATGCCTGTCTTCAGCCGATTTGTTCTCTGCATGGTGCGGCAGTGGTGACCGTAGAGGGCATCGGAAGCACCAAGACAAAACTACATCCAGTTCAGGAGCGTATAGTAAAGGCTCATGGGTCTCAGTGTGGCTTCTGTACTCCTGGGATGGTGATGTCCATGTATACATTACTGAGAAACAACCCACATCCCACCATTGAGGACATTCGAGAGACACTGGGAGGGAACCTGTGTCGTTGTACGGGATATCGACCAATAATCGAtggatttaaaacattttgtgaaACTCCAGTTTGCTGCCAAAATGGTGGTGGCAATGGAAAATGTTGCATGGAAAACGGCAACTCTCACAACGAATCTGATATATCTGGAGAACTTTTCATCATGGATAATGTCTTACCCCTGGACCCAACTCAAGATCTGATCTTTCCACCAGAGTTACTGATTATGGGAAAGAAAAAAGCAGAACGACATTGTTTCCAGGGTGAAAAGGTCAGGTGGATTTCACCATCAGATCTAAAAGATTTAATCAAGCTGAAAGCTGAACACTCTGACGCACCTCTGTTGGTTGGAAACACAACCATAGGGCCAAAGATGAATCTGAACAAAACTGTCCATCCATTGGTGATCTATGGTGGAAGCATTGCAGAACTTCAAGCTATCAAATGgagaaaaaattGCATAACTGTAGGGGCAGGATGCAGTTTGTCTGTTTTGAAGGATGTTCTTCAGCAAAGAATTGAGGATCTTGGACCAGAGAAGAGCAGGGTTTACCAGGCTCTCGTTCAGACACTGCAGTGTTTGGCCGGCAAACAGATTCGTAACATGGCTACCATTGGTGGAAATATCCTGAGTGCCAACCCCAAGTATGACCTGAGCAGCATTTTAGCAGCAGCTGAGTGTACGCTACACATTGCTTCAAAAGATGGTGATCGAGAGATTTGTCTAAGTgaggagtttttcacagactttggAAAAACAGCTCTACGACCTGAGGAGATTCTGCTGGCTATTGACATTCCTCATTCAAAGCCGTGGGAGTTTGTGTCCGCATTTCGCCAGGCACAGCGCAGAGAGTTCGCTTTCTCCATAGTGAATGCTGGTATGAGAGTGGCATTCAGACATGATTCAAATGTGGTGGAGCATCTGGATATTTTTTATGGAGGCGTGGGTTGCACTCTGGTAAAAGCCAGACACACCTGTAAGGAACTGATTGGAAGAAAATGGGATGAGAAACTTCTGGCAGAGGGAACACAGCTCTTAGAAGAAGAAATCTCGGTACCCGCTACTGTCCCTGGTGGACGGGAAGAATATCGCAAAGCTCTAGTGCTCAGTTTCTTTTTCAAGTTTTACATGCAAGTGTTGCTGGAGCTTCAACAAAGGGAGGTTGGCGTGAATGATCTCCCATTAGAGTATCTCAGCGCATTAAAACCCTTCAAAAATGAAGTGCCGCAAGGAAATTACTCTTACCAACTTGTACCAGAGACTCAGTCCTCTAGTGACCCAGTAGGACGTCCCAACGTACACCTGGCAGCGCTCCAGCAGGCTACAGGAGAAGCTGTGTATTATGATGACATCCCATCTGTTAAAGGAGAACTGTTTGTTTCCATGGTAACCAGCACCCGGGCTCATGCAAAGATCATCTCTATAGATGCATCAGTGGCTCTAGCTATGCCTGGAGTGGTTGACTTCATCTCTGCTAAGGATGTTCCTGGGCAGAATCGAAGACTCTGGTTCAACAATCCTGAGGAACTTTTTGCAGAAGAGGAGGTCATTTGTGTGGGGCAGATTATTGGTGCGATTGTAGCTGAGACTAGAGAACAAGCTAAACGAGCAGCTCAGCAAGTAGACATTACTTACCAGGATATGCAACCTGTCTTTTTCACAATTGAGgAGGCTATTGAACACGAGTCATTTTTTGACCCCAAGAGAAAGCTGGAAAGAGGAAATGTGGAAGAAGGTTTTGCAAAGGCAGACCAAATTCTAGAGGGTGAGATGTATATGGGTGGCCAGGAACACTTCTACATGGAAACTCAGGGAGTGATTGCAATTCCTACAGGAGAAGCAAGTGAAATTGAGCTATATGTTGCCAGTCAGCATGCAGCTTACACTCAGgAAGTGGTGGGAATCACTCTCGGCATTGACTCCAACAAGATCACGTGTCATGTAAAGAGGCTGGGAGGTGGTTTTGGTGGTAAAGTCATGAAGATTGCATCATTATCTGCTATCGCTGCTACGGCTGCCATAAAGACTGGCCATGCTGTGCGATGTGTACTAGAACGTGGAGATGACATGCTCATCACCAGTGGAAGATCTCCTTTCTTGGGGAGGTACAAGATTGGCTATATGAATGACGGAACAATCCTGGCTGCTGATATCACATACTACAGTAATGGAGGATGCACTCTTGATGAATCCTCTTTTATTATGGAGAAAGCTCTTCTTCACATGGATAATGGCTACAAGATCCCTAATCTACGTGGACGTGGACTGGTGTGCAAGACCTTCTTACCTTCATACACAGCCTTCCGTGGATTTGGTGGACCTCAAGGGTTGACCATTATTGAGAGTGTGCTACATGAGGTGGCGGTCAAGTGTGGCCTACCTGCACATCAGGTAAGAGACATCAATTTGTACAAGGAGGAGAAATGCTTTACCCACCACAAGCAGCTGTTTTCCCCTCATGATATGGTGCGCTGCTGGAACGAGTGTCTAGAGAAGTCCAACTACACCCAACGATGCCAGTACATCGAGCAGTTTAACGGCCACAACCATTGGAAGAAGCGAGGGATTTCCATTGTCCCTATAAAGTTTGGAATCGGATTCTCGAAGGGCTTCTATAACCAGGGAGCAGCATTGGTGAACGTCTACAAAGATGGATCAGTTGTGATTTCTCATGGAGGAACTGAGATGGGTCAAGGTATCAACACCAAAGCCATACAGATTGCAAGCCGCATTCTGAAGGTTTCAATGTCCTCGATCCACATCAAAGAGACTTGTACTGGAAATGTGCCCAATGCTGCACCATCCGCGGCATCTTTCGGCACAGATGCTGTTGGGATGGCGGTCAAGaATGGTTGTGAGAAACTAATGAGACGTCTAGAGCCACTCATTAAGAAACATCCCCAATACACATGGCAACAACTGGTGGTGGAAGCTTACTGCCAGAAGATTAGTTTGTCAGCAACTGGTTTCTTTATGGGCCCCCACACCAGCGTTGACTGGGAGAAGAGTGAGGGCAATGCGTACTATTACTTTACTTTTGGGGCCTGTTGCTCAGAGGTGGAAATTGATTGCTTGACAGGAGATCACAAGAACATTAGGACTGACATTGTGATGGATGTTGGTCGGAGCATAAATCCTGCTTTGGACGTCGGACAGGTTGAGGGTGGTTTTGTCCAGGGCATTGGACTCTATACTATAGAGGAGTTGCAGTTTTCTCCGCAGGGTGTTTTGTTGACCAGAGGACCCTCGCAGTACAAAATTCCAGCTCTGTGTGACGTCCCTCCTCAAATTAATGTCCATCTCCTGAGAAATGCTGACAATCCTCATGCCATCTACTCCTCAAAGGGCATTGGAGAACCCCCAGTATTTTTTGGCTGTACTTTATTCTTCGCCATTAAAGAAGCGATTGCCGCCGCACGGAAAGAGAGAGGCCTGAGCGAAAGTTTCTCTTTCTCTTCTCCTGCCACTGCAGAGAAGATACGCATGGCCTGTGAAGACTGCTTCACCAGAATGATTCCACAAGACAAGAAAGTAAAAACCAAACCGTGGGCCATCAACGTGTGA
>TCONS_00041293
CAGCATTGGTGAACGTCTACAAAGATGGATCAGTTGTGATTTCTCATGGAGGAACTGAGATGGGTCAAGGTATCAACACCAAAGCCATACAGATTGCAAGCCGCATTCTGAAGGTTTCAATGTCCTCGATCCACATCAAAGAGACTTGTACTGGAAATGTGCCCAATGCTGCACCATCCGCGGCATCTTTCGGCACAGATGCTGTTGGGATGGCGGTCAAGGTATAAAAACTGCCAATTTTCTGGTATTTATGCATCATTTCGTgactaaaatttaaatatttttacacagaATGGTTGTGAGAAACTAATGAGACGTCTAGAGCCACTCATTAAGAAACATCCCCAATACACATGGCAACAACTGGTGGTGGAAGCTTACTGCCAGAAGATTAGTTTGTCAGCAACTGGTTTCTTTATGTAAGTGGTCAATCTTGAAGCAACATGTAGCCACATGATAAAATGTTTGAACATCTAACAAAATAGTTCCACTGATTGTGAGTTGAATGAATAtgtcttaataaataaatcaaagcaatGATT

Function

symbol description
aox5 Predicted to enable aldehyde oxidase activity. Located in cytoplasm. Is expressed in several structures, including fin; neural crest; pigment cell; post-vent region; and xanthoblast. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis. Orthologous to human AOX1 (aldehyde oxidase 1).

GO:

id name namespace
GO:0009115 xanthine catabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005829 cytosol cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0004854 xanthine dehydrogenase activity molecular_function
GO:0004855 xanthine oxidase activity molecular_function
GO:0051536 iron-sulfur cluster binding molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function
GO:0071949 FAD binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-001205-2 Predicted to enable aldehyde oxidase activity. Located in cytoplasm. Is expressed in several structures, including fin; neural crest; pigment cell; post-vent region; and xanthoblast. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis. Orthologous to human AOX1 (aldehyde oxidase 1).

Ensembl:

ensembl_id ENSDARG00000071475

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041291 False 4033 mRNA 0.46 32 14083729 14115292
TCONS_00041292 False 4011 mRNA 0.47 35 14084036 14115316
TCONS_00041293 True 542 processed_transcript 0.40 3 14088353 14089062

Neighbor

gene id symbol gene type direction distance location
XLOC_020996 BX649296.1 coding downstream 64007 14019604 ~ 14019722 (-)
XLOC_020995 BX649510.1 coding downstream 137662 13945953 ~ 13946067 (-)
XLOC_020994 s100b coding downstream 226000 13846130 ~ 13857729 (-)
XLOC_020993 CT990618.1 coding downstream 367144 13711434 ~ 13716585 (-)
XLOC_020992 NA coding downstream 390102 13668985 ~ 13693627 (-)
XLOC_020998 si:ch211-246m6.4 coding upstream 12156 14127472 ~ 14128716 (-)
XLOC_020999 si:ch211-246m6.5 coding upstream 30194 14145510 ~ 14161309 (-)
XLOC_021000 si:ch211-246m6.5 coding upstream 63497 14178813 ~ 14272699 (-)
XLOC_021001 NA coding upstream 160430 14275746 ~ 14298602 (-)
XLOC_021002 NA coding upstream 184484 14299800 ~ 14301873 (-)
XLOC_020990 NA non-coding downstream 476166 13606281 ~ 13607563 (-)
XLOC_021004 NA non-coding upstream 217134 14332450 ~ 14334135 (-)
XLOC_021008 CR352252.1 non-coding upstream 577796 14693112 ~ 14693228 (-)
XLOC_021009 BX936391.1 non-coding upstream 649682 14764998 ~ 14787062 (-)

Expression


Co-expression Network