G121192


Basic Information

Item Value
gene id G121192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 20509386 ~ 20510757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU139935
CTCTGTACCAACGTCTCTCTGTACCAACGTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCTCTCTGTACCAACATCACTCTGTACCAACCTCACTCTGTACCAACCTCACTCTGTACCAATGTCTCTCTGTACCAACATCTCTCTGTACCAACGTCACTCTGTACCATCTTCACTCTGTACCAACGTCACTCTGTACCAACGTCTCTCTGTACCAACGTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCTCTCTGTACCAATCTCTCTCTGTACCAACATCACTCTGTACCAATATCACTCTGTACCAACCTCACTCTGCTAATCAAAGTGTGGAGGAGTAGGTTATTAGTTGGATCAGGTACATTAGTGCAGGGCTGGAACTAAAACC
>TU139936
TGTACCAACGTCACTCTGTACCAACTTCACCCTGTACCAACTTAACCCTGTACCAACCTCTCTCTGTACCAACCTCTCTCTGTACCAACGTCACTCTGCACCAACGTCACTCTGTACCAACCTCTCTCTGTACCAACATCTCTCTGTACCAACCTCTCTCTGTACCAACCTCTCTCTGTACCAACGTCACTCTGTGCCAACTTCACTCTGTACCAACGTCTCTCTGTACCAACCTCAGTCTGTACCAACTTCACCCTATACCAACCTCTCTCTGTACCAACCTCTCTCTGTACCAACGTCACTCTGTACCAACGTCACTCTGTACCAACGTCACTCTGTACCATCTTCACTCTGTACCAACGTCACTCTGTACCAACGTCTCTCTGTACCAACGTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCACTCTGTACCAATCTCTCTCTGTACCAATCTCTCTCTGTACCAACATCACTCTGTACCAATATCACTCTGTACCAACCTCACTCTGCTAATCAAAGTGTGGAGGAGTAGGTTATTAGTTGGATCAGGTACATTAGTGCAGGGCTGGAACTAAAACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594294, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139935 False 491 lncRNA 0.45 2 20509386 20509940
TU139936 True 600 lncRNA 0.47 3 20509386 20510757

Neighbor

gene id symbol gene type direction distance location
LOC110509434 NA coding downstream 4517 20465981 ~ 20504869 (-)
LOC110509624 ret1 coding downstream 43532 20462682 ~ 20465854 (-)
LOC110503575 LOC106605669 coding downstream 56830 20438795 ~ 20452556 (-)
LOC118936525 LOC106605721 coding downstream 88462 20413499 ~ 20420924 (-)
LOC110503568 c1r/c1s coding downstream 109893 20391977 ~ 20399493 (-)
LOC110537423 LOC105029961 coding upstream 86299 20597056 ~ 20602488 (-)
LOC110537462 LOC106576526 coding upstream 140477 20651234 ~ 20660987 (-)
LOC110537468 LOC106605860 coding upstream 152235 20662992 ~ 20665219 (-)
LOC110537475 LOC106605848 coding upstream 157811 20668568 ~ 20673278 (-)
LOC110537483 LOC106605857 coding upstream 163019 20673776 ~ 20688855 (-)
G121176 NA non-coding downstream 37433 20470108 ~ 20471953 (-)
G121175 NA non-coding downstream 39379 20469011 ~ 20470007 (-)
G121174 NA non-coding downstream 41253 20467152 ~ 20468133 (-)
G121168 NA non-coding downstream 75007 20428856 ~ 20434379 (-)
G121167 NA non-coding downstream 75311 20428603 ~ 20434075 (-)
G121197 NA non-coding upstream 22110 20532867 ~ 20549210 (-)
G121203 NA non-coding upstream 57843 20568600 ~ 20573951 (-)
G121219 NA non-coding upstream 74991 20585748 ~ 20628481 (-)
G121238 NA non-coding upstream 130998 20641755 ~ 20643822 (-)
G121188 NA other downstream 8799 20498896 ~ 20500587 (-)
G121046 NA other downstream 297019 20211068 ~ 20212367 (-)
LOC110537275 grl1 other downstream 580926 19924063 ~ 19928533 (-)
LOC118944062 LOC106575151 other downstream 813822 19692971 ~ 19695564 (-)
G121208 NA other upstream 115800 20626557 ~ 20627700 (-)
G121421 LOC106576258 other upstream 545841 21056598 ~ 21058849 (-)
G121533 LOC106583873 other upstream 777859 21288616 ~ 21346687 (-)
G121738 NA other upstream 951936 21462693 ~ 21463030 (-)
G121756 NA other upstream 979510 21490267 ~ 21547037 (-)

Expression


Co-expression Network