Gene
RNA
| Item | Value |
|---|---|
| gene id | G120498 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20962063 ~ 20962813 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cadherin-like and PC-esterase domain-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139094 | True | 572 | lncRNA | 0.40 | 2 | 20962063 | 20962813 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pou2f2a | pou2f2 | coding | upstream | 76987 | 20741051 ~ 20885076 (+) |
| LOC110537492 | LOC106605858 | coding | upstream | 266633 | 20679841 ~ 20695430 (+) |
| LOC110537453 | atn1 | coding | upstream | 312790 | 20629126 ~ 20649273 (+) |
| LOC110537439 | LOC106576545 | coding | upstream | 333581 | 20615636 ~ 20628482 (+) |
| LOC110537428 | mlf2 | coding | upstream | 349583 | 20608551 ~ 20612480 (+) |
| LOC110509768 | LOC106576258 | coding | downstream | 27318 | 20990131 ~ 21058856 (+) |
| LOC110509817 | LOC106576382 | coding | downstream | 112427 | 21075240 ~ 21103699 (+) |
| LOC110509776 | LOC106576357 | coding | downstream | 142687 | 21105500 ~ 21136731 (+) |
| LOC110534415 | grik5 | coding | downstream | 185509 | 21148322 ~ 21311249 (+) |
| LOC110537588 | NA | coding | downstream | 432351 | 21395164 ~ 21411507 (+) |
| G120495 | NA | non-coding | upstream | 3235 | 20958105 ~ 20958828 (+) |
| G120487 | NA | non-coding | upstream | 28019 | 20932743 ~ 20934044 (+) |
| G120471 | NA | non-coding | upstream | 86224 | 20875403 ~ 20875839 (+) |
| G120469 | NA | non-coding | upstream | 87555 | 20874273 ~ 20874508 (+) |
| G120468 | NA | non-coding | upstream | 90844 | 20870965 ~ 20871219 (+) |
| G120502 | NA | non-coding | downstream | 7642 | 20970455 ~ 20970984 (+) |
| G120512 | NA | non-coding | downstream | 44276 | 21007089 ~ 21011765 (+) |
| G120540 | NA | non-coding | downstream | 145280 | 21108093 ~ 21108341 (+) |
| G120555 | NA | non-coding | downstream | 202201 | 21165014 ~ 21165265 (+) |
| G120556 | NA | non-coding | downstream | 203876 | 21166689 ~ 21167553 (+) |
| G120169 | NA | other | upstream | 542935 | 20407862 ~ 20419128 (+) |
| G120259 | NA | other | upstream | 641807 | 20319739 ~ 20320256 (+) |
| LOC110537348 | LOC106575899 | other | upstream | 777438 | 20179254 ~ 20185414 (+) |
| G120211 | NA | other | upstream | 790682 | 20171082 ~ 20171381 (+) |
| zyx | zyx | other | upstream | 804953 | 20145710 ~ 20165887 (+) |
| LOC118938333 | LOC106605563 | other | downstream | 579284 | 21532987 ~ 21547038 (+) |
| G121677 | NA | other | downstream | 622608 | 21585421 ~ 21586101 (+) |
| LOC110537735 | LOC106595974 | other | downstream | 858401 | 21821165 ~ 21825285 (+) |
| G122030 | NA | other | downstream | 1053849 | 22015130 ~ 22018815 (+) |
