Gene
RNA
| Item | Value |
|---|---|
| gene id | G120540 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 21108093 ~ 21108341 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139153 | True | 249 | lncRNA | 0.37 | 1 | 21108093 | 21108341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509817 | LOC106576382 | coding | upstream | 4394 | 21075240 ~ 21103699 (+) |
| LOC110509768 | LOC106576258 | coding | upstream | 49237 | 20990131 ~ 21058856 (+) |
| erfl3 | LOC106576393 | coding | upstream | 130612 | 20900204 ~ 20977481 (+) |
| pou2f2a | pou2f2 | coding | upstream | 223017 | 20741051 ~ 20885076 (+) |
| LOC110537492 | LOC106605858 | coding | upstream | 412663 | 20679841 ~ 20695430 (+) |
| LOC110534415 | grik5 | coding | downstream | 39981 | 21148322 ~ 21311249 (+) |
| LOC110537588 | NA | coding | downstream | 286823 | 21395164 ~ 21411507 (+) |
| LOC110537581 | LOC106605559 | coding | downstream | 369301 | 21477642 ~ 21491358 (+) |
| LOC110534436 | LOC106605563 | coding | downstream | 403999 | 21512340 ~ 21530893 (+) |
| LOC118944067 | LOC106597946 | coding | downstream | 422907 | 21531248 ~ 21533013 (+) |
| G120512 | NA | non-coding | upstream | 96328 | 21007089 ~ 21011765 (+) |
| G120502 | NA | non-coding | upstream | 137109 | 20970455 ~ 20970984 (+) |
| G120498 | NA | non-coding | upstream | 145280 | 20962063 ~ 20962813 (+) |
| G120495 | NA | non-coding | upstream | 149265 | 20958105 ~ 20958828 (+) |
| G120487 | NA | non-coding | upstream | 174049 | 20932743 ~ 20934044 (+) |
| G120555 | NA | non-coding | downstream | 56673 | 21165014 ~ 21165265 (+) |
| G120556 | NA | non-coding | downstream | 58348 | 21166689 ~ 21167553 (+) |
| G120557 | NA | non-coding | downstream | 64654 | 21172995 ~ 21174078 (+) |
| G120559 | NA | non-coding | downstream | 67134 | 21175475 ~ 21175735 (+) |
| G120563 | NA | non-coding | downstream | 90384 | 21198725 ~ 21199086 (+) |
| G120169 | NA | other | upstream | 688965 | 20407862 ~ 20419128 (+) |
| G120259 | NA | other | upstream | 787837 | 20319739 ~ 20320256 (+) |
| LOC110537348 | LOC106575899 | other | upstream | 923468 | 20179254 ~ 20185414 (+) |
| LOC118938333 | LOC106605563 | other | downstream | 433756 | 21532987 ~ 21547038 (+) |
| G121677 | NA | other | downstream | 477080 | 21585421 ~ 21586101 (+) |
| LOC110537735 | LOC106595974 | other | downstream | 712873 | 21821165 ~ 21825285 (+) |
| G122030 | NA | other | downstream | 908321 | 22015130 ~ 22018815 (+) |
| LOC110537939 | apoc1 | other | downstream | 1234186 | 22342491 ~ 22346615 (+) |
