G120555


Basic Information

Item Value
gene id G120555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21165014 ~ 21165265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU139169
ctgcaacagcgtttcacctgtcataaaccctcacactagactactgtcataaaccctcacactagactactgcaacagcgtttcccctgtcataacccctcacactagactactgcaacagcgtttcccctgtcataacccctcacactagactactgcaacactgtttcccctgtcataaaccctcacactagactactgcaacactgtttcccctgtcataaaccctcacactagactactgtcataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139169 True 252 lncRNA 0.43 1 21165014 21165265

Neighbor

gene id symbol gene type direction distance location
LOC110509776 LOC106576357 coding upstream 28283 21105500 ~ 21136731 (+)
LOC110509817 LOC106576382 coding upstream 61315 21075240 ~ 21103699 (+)
LOC110509768 LOC106576258 coding upstream 106158 20990131 ~ 21058856 (+)
erfl3 LOC106576393 coding upstream 187533 20900204 ~ 20977481 (+)
pou2f2a pou2f2 coding upstream 279938 20741051 ~ 20885076 (+)
LOC110537588 NA coding downstream 229899 21395164 ~ 21411507 (+)
LOC110537581 LOC106605559 coding downstream 312377 21477642 ~ 21491358 (+)
LOC110534436 LOC106605563 coding downstream 347075 21512340 ~ 21530893 (+)
LOC118944067 LOC106597946 coding downstream 365983 21531248 ~ 21533013 (+)
LOC118938333 LOC106605563 coding downstream 367722 21532987 ~ 21547038 (+)
G120540 NA non-coding upstream 56673 21108093 ~ 21108341 (+)
G120512 NA non-coding upstream 153249 21007089 ~ 21011765 (+)
G120502 NA non-coding upstream 194030 20970455 ~ 20970984 (+)
G120498 NA non-coding upstream 202201 20962063 ~ 20962813 (+)
G120495 NA non-coding upstream 206186 20958105 ~ 20958828 (+)
G120556 NA non-coding downstream 1424 21166689 ~ 21167553 (+)
G120557 NA non-coding downstream 7730 21172995 ~ 21174078 (+)
G120559 NA non-coding downstream 10210 21175475 ~ 21175735 (+)
G120563 NA non-coding downstream 33460 21198725 ~ 21199086 (+)
G120564 NA non-coding downstream 34157 21199422 ~ 21199763 (+)
G120169 NA other upstream 745886 20407862 ~ 20419128 (+)
G120259 NA other upstream 844758 20319739 ~ 20320256 (+)
LOC110537348 LOC106575899 other upstream 980389 20179254 ~ 20185414 (+)
G121677 NA other downstream 420156 21585421 ~ 21586101 (+)
LOC110537735 LOC106595974 other downstream 655949 21821165 ~ 21825285 (+)
G122030 NA other downstream 851397 22015130 ~ 22018815 (+)
LOC110537939 apoc1 other downstream 1177262 22342491 ~ 22346615 (+)

Expression


Co-expression Network