G120641


Basic Information

Item Value
gene id G120641
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21376234 ~ 21376567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU139264
GTGTTATGTGTTGTATTtgacacgtgacaaataaagtttgatttgatttgtaatggtcgtgctgtttaatcagcttcttgatatgccacacctgccaggtggatggattatcttggcaatcaggaaatgctcactaacagcgatgtaaacaaatgtgcaaaaaatgtagagaaataagctttttgtctgGAAAATTGGAAAATTGCtggaatgttttatttcagctcatgaaacatgggtccaacacttaacatgttgcatttatgtttTTGCTCTGTGTACAGGAATCTTTCATGACATGTACCATGGATTGCTTTGATTcatttatatatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139264 True 334 lncRNA 0.35 1 21376234 21376567

Neighbor

gene id symbol gene type direction distance location
LOC110534415 grik5 coding upstream 64985 21148322 ~ 21311249 (+)
LOC110509776 LOC106576357 coding upstream 239503 21105500 ~ 21136731 (+)
LOC110509817 LOC106576382 coding upstream 272535 21075240 ~ 21103699 (+)
LOC110509768 LOC106576258 coding upstream 317378 20990131 ~ 21058856 (+)
erfl3 LOC106576393 coding upstream 398753 20900204 ~ 20977481 (+)
LOC110537588 NA coding downstream 18597 21395164 ~ 21411507 (+)
LOC110537581 LOC106605559 coding downstream 101075 21477642 ~ 21491358 (+)
LOC110534436 LOC106605563 coding downstream 135773 21512340 ~ 21530893 (+)
LOC118944067 LOC106597946 coding downstream 154681 21531248 ~ 21533013 (+)
LOC118938333 LOC106605563 coding downstream 156420 21532987 ~ 21547038 (+)
G120632 NA non-coding upstream 13213 21362619 ~ 21363021 (+)
G120627 NA non-coding upstream 16741 21352155 ~ 21359493 (+)
G120624 NA non-coding upstream 26724 21349310 ~ 21349510 (+)
G120620 NA non-coding upstream 32655 21342509 ~ 21343579 (+)
G120583 NA non-coding upstream 149008 21226984 ~ 21227226 (+)
G120646 NA non-coding downstream 3509 21380076 ~ 21380287 (+)
G121618 NA non-coding downstream 87862 21464429 ~ 21464811 (+)
G121616 NA non-coding downstream 99247 21475814 ~ 21548364 (+)
G121624 NA non-coding downstream 110404 21486971 ~ 21545894 (+)
G121676 NA non-coding downstream 210024 21586591 ~ 21594643 (+)
G120169 NA other upstream 957106 20407862 ~ 20419128 (+)
G120259 NA other upstream 1055978 20319739 ~ 20320256 (+)
LOC110537348 LOC106575899 other upstream 1191609 20179254 ~ 20185414 (+)
G121677 NA other downstream 208854 21585421 ~ 21586101 (+)
LOC110537735 LOC106595974 other downstream 444647 21821165 ~ 21825285 (+)
G122030 NA other downstream 640095 22015130 ~ 22018815 (+)
LOC110537939 apoc1 other downstream 965960 22342491 ~ 22346615 (+)

Expression


Co-expression Network