G120646


Basic Information

Item Value
gene id G120646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21380076 ~ 21380287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU139269
tcccacagttgtgtcaagttggctggatgtcctttgggtggtggaccactcttgaaacacacagaaaactgttgagtgtgaaaaacccagcagcattgcagttcttaacaTACTCAAACTGGAGTGCctgccacctactaccatacccagttcaaaggcacttaagtcttttgtcttgcccttttcaccctctgaatggcacacatacacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139269 True 212 lncRNA 0.46 1 21380076 21380287

Neighbor

gene id symbol gene type direction distance location
LOC110534415 grik5 coding upstream 68827 21148322 ~ 21311249 (+)
LOC110509776 LOC106576357 coding upstream 243345 21105500 ~ 21136731 (+)
LOC110509817 LOC106576382 coding upstream 276377 21075240 ~ 21103699 (+)
LOC110509768 LOC106576258 coding upstream 321220 20990131 ~ 21058856 (+)
erfl3 LOC106576393 coding upstream 402595 20900204 ~ 20977481 (+)
LOC110537588 NA coding downstream 14877 21395164 ~ 21411507 (+)
LOC110537581 LOC106605559 coding downstream 97355 21477642 ~ 21491358 (+)
LOC110534436 LOC106605563 coding downstream 132053 21512340 ~ 21530893 (+)
LOC118944067 LOC106597946 coding downstream 150961 21531248 ~ 21533013 (+)
LOC118938333 LOC106605563 coding downstream 152700 21532987 ~ 21547038 (+)
G120641 NA non-coding upstream 3509 21376234 ~ 21376567 (+)
G120632 NA non-coding upstream 17055 21362619 ~ 21363021 (+)
G120627 NA non-coding upstream 20583 21352155 ~ 21359493 (+)
G120624 NA non-coding upstream 30566 21349310 ~ 21349510 (+)
G120620 NA non-coding upstream 36497 21342509 ~ 21343579 (+)
G121618 NA non-coding downstream 84142 21464429 ~ 21464811 (+)
G121616 NA non-coding downstream 95527 21475814 ~ 21548364 (+)
G121624 NA non-coding downstream 106684 21486971 ~ 21545894 (+)
G121676 NA non-coding downstream 206304 21586591 ~ 21594643 (+)
G121726 NA non-coding downstream 285996 21666283 ~ 21667174 (+)
G120169 NA other upstream 960948 20407862 ~ 20419128 (+)
G120259 NA other upstream 1059820 20319739 ~ 20320256 (+)
LOC110537348 LOC106575899 other upstream 1195451 20179254 ~ 20185414 (+)
G121677 NA other downstream 205134 21585421 ~ 21586101 (+)
LOC110537735 LOC106595974 other downstream 440927 21821165 ~ 21825285 (+)
G122030 NA other downstream 636375 22015130 ~ 22018815 (+)
LOC110537939 apoc1 other downstream 962240 22342491 ~ 22346615 (+)

Expression


Co-expression Network