G121584


Basic Information

Item Value
gene id G121584
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21408505 ~ 21423391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU140405
AGCGCTCATGGCACTTGACAGAAATACATTTGTCGTCGCTGAGTAGCCAAGGCAACAGTCTGTTGTAAATACTTGACAAGAAAAGTTGTGTGTGCAAGCTCAATATAATATTATCTTCCTGGAGCAAAGTCCCTCAGCCTTACAGTAAAAAGGCAATGCATACTACCCCTGCCTGAAAGTGTGATTATCTCTATGATGTGCGGATATATACACGTGGTTAAATGTCAGACTGTGGCTTAGCAGGAACAATGCCaggagatatactgtagctgaccAGGAGCTTGGCTCTGGTGCCATTTAAGCTATTACTGTATATTATCTTATAGTTATTTTATAACTATTATACTGACCCATCTTCTTCTACATTGTGTGATGAGATATTTATATGTGATGATCATTATAGTCTTATACAACGATAGAATCTACTATTCTGATCATGATATCTGATAGCCAGACAAGATATGATATCGTACATGTCGCCCAGAGTGCAGCTCTTTTTACACAAAATGGCAGTATCAAAGGAACAAAAGCAGGTCAGTTAATTATCTGTGCACCTGAATGATGTCAATACTGTAAATAAAGGAAATAAACTct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140405 True 594 lncRNA 0.38 2 21408505 21423391

Neighbor

gene id symbol gene type direction distance location
LOC110534425 LOC106605569 coding downstream 29482 21376426 ~ 21379023 (-)
LOC110537544 LOC106605712 coding downstream 59623 21322013 ~ 21348882 (-)
LOC110509793 LOC106576373 coding downstream 334300 21064067 ~ 21074205 (-)
LOC110537483 LOC106605857 coding downstream 719650 20673776 ~ 20688855 (-)
LOC110537475 LOC106605848 coding downstream 735227 20668568 ~ 20673278 (-)
LOC110537611 NA coding upstream 130127 21553518 ~ 21555867 (-)
LOC118938339 LOC106605559 coding upstream 154758 21578149 ~ 21586856 (-)
LOC110534443 LOC106605563 coding upstream 163587 21586978 ~ 21594470 (-)
LOC118944069 LOC106605559 coding upstream 171845 21595236 ~ 21596535 (-)
LOC110534450 LOC106605556 coding upstream 207999 21631390 ~ 21633645 (-)
G121571 NA non-coding downstream 26463 21381736 ~ 21382042 (-)
G121559 NA non-coding downstream 47305 21360852 ~ 21361200 (-)
G121550 NA non-coding downstream 57074 21351127 ~ 21351431 (-)
G121521 NA non-coding downstream 97424 21266169 ~ 21311081 (-)
G121506 NA non-coding downstream 172723 21235495 ~ 21235782 (-)
G121739 NA non-coding upstream 39659 21463050 ~ 21463271 (-)
G121754 NA non-coding upstream 59744 21483135 ~ 21485499 (-)
G121756 NA non-coding upstream 67165 21490267 ~ 21547037 (-)
G121826 NA non-coding upstream 206377 21629768 ~ 21663939 (-)
G121533 LOC106583873 other downstream 61818 21288616 ~ 21346687 (-)
G121421 LOC106576258 other downstream 349656 21056598 ~ 21058849 (-)
G121208 NA other downstream 780805 20626557 ~ 20627700 (-)
G121188 NA other downstream 907918 20498896 ~ 20500587 (-)
LOC110509624 ret1 other downstream 942716 20462682 ~ 20465854 (-)
G121738 NA other upstream 39302 21462693 ~ 21463030 (-)
G122733 LOC106592382 other upstream 373116 21796507 ~ 21812432 (-)
G122761 LOC106578847 other upstream 428042 21851433 ~ 21856413 (-)
G122829 LOC106605673 other upstream 602908 22026299 ~ 22027717 (-)

Expression


Co-expression Network