G121756


Basic Information

Item Value
gene id G121756
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21490267 ~ 21547037 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU140631
TTCAGTAGGACATGGGTGAAAAGACAACACTTTATTTAAGACAATAATTAATGAAGAGGAAGTATAAACATAAGACAACAGCACAAGCCTGCGTCTCCTCCGAGAATTTACAAGCTTATGCAAAAACAAGTCATATTTTACATAAACACCAGTTAACTGTACTATCAATTGAAATGTTTTACCTTTAAGGTATTTACAAGTTAATTAAACCTGAATTTGTACTTAAATAACAGAGTTtacatacatgatcaaatacagaacaCAGAAAGGGACTCAGTGAATGGACTCCAGAGCAACAGTCACAGTCACAAGGGCAGTAAATATCTAAGAACTTTTAGAAACAGAACTAGGCAGTGCTGCTGAGCAGTGGATGTTTGCCCTTTCATTTATCATGTTGAAGACCAGTTTTCAagatttttgtttttatttatagaGATGATTGACAAAAACACACTGTCGAGGTGGGTTCTATTCTAAGGGGATAGACCCCTCCCATCTgacctcttgttctctctcctcaCAATGTAAAAGCATTGGAAAGGAGCTGGGCATACTAAACCCAGCCCTATGGTGGCAAGATGGGGCAAGTACAATATAAACAAAATCACTTATTTCTATCCAGTCCTTTTTCAGTGAGGGGAGTCAGTGAAGGTAGAGAGTGATTGGCTCCCAGCCAGCAGACAGACATGCAGTGTGCTTACTGTGGTGGTCTCAGTGGTTgatcagaggcagagagagagggctagcaGGGCCGTCAGCATCAGACCAACTCTGGACAGGAATGGAGGGGCAGGCGAGTGGCCtgggagagaaagaagaaagggagagaaggggaacaaagagaatgggagaggagggggacaaagagaatgggagaggaggacaaagagaatgggagaggaggcggacaaagagaatgggagaggagggggacaaagagaatgggagaggaggaggacaaagagaatgggagagcaggaggacaaagagattgggagaggagggggacaaagagattgggagaggagggggacaaagagaatgggagaggaggaggacaaag
>TU140630
TTCAGTAGGACATGGGTGAAAAGACAACACTTTATTTAAGACAATAATTAATGAAGAGGAAGTATAAACATAAGACAACAGCACAAGCCTGCGTCTCCTCCGAGAATTTACAAGCTTATGCAAAAACAAGTCATATTTTACATAAACACCAGTTAACTGTACTATCAATTGAAATGTTTTACCTTTAAGGTATTTACAAGTTAATTAAACCTGAATTTGTACTTAAATAACAGAGTTtacatacatgatcaaacacagaacacagaaaggGACTCAGTGAATGGACTCCAGGGCAACAGTCACAGTCACAAGGGCAGTAAATATCTAAGAACTTTTAGAAACAGAACTAGGCAGTGCTGCTGAGCAGTGGATGTTTGCCCTTTCATTTATCATGTTGAAGACCAGTTTTCAagatttttgtttttatttatagaGATGATTGACAAAAACACACTGTCGAGGTGGGTTCTATTCTAAGGGGATAGACCCCTCCCATCTgacctcttgttctctctcctcaCAATGTAAAAGCATTGGAAAGGAGCTGGGCATACTAAACCCAGCCCTATGGTGGCAAGATGGGGCAAGTACAATATAAACAAAATCACTTATTTCTATCCAGTCCTTTTTCAGTGAGGGGAGTCAGTGAAGGTAGAGAGTGATTGGCTCCCAGCCAGCAGACAGACATGCAGTGTGCTTACTGTGGTGGTCTCAGTGGTTgatcagaggcagagagagagggctagcaGGGCCGTCAGCATCAGACCAACTCTGGACAGGAATGGAGGGGCAGGCGAGTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140631 False 1063 TUCP 0.44 3 21490267 21547037
TU140630 True 802 lncRNA 0.42 2 21490556 21547037

Neighbor

gene id symbol gene type direction distance location
LOC110534425 LOC106605569 coding downstream 111533 21376426 ~ 21379023 (-)
LOC110537544 LOC106605712 coding downstream 141674 21322013 ~ 21348882 (-)
LOC110509793 LOC106576373 coding downstream 416351 21064067 ~ 21074205 (-)
LOC110537483 LOC106605857 coding downstream 801701 20673776 ~ 20688855 (-)
LOC110537475 LOC106605848 coding downstream 817278 20668568 ~ 20673278 (-)
LOC110537611 NA coding upstream 6481 21553518 ~ 21555867 (-)
LOC118938339 LOC106605559 coding upstream 31112 21578149 ~ 21586856 (-)
LOC110534443 LOC106605563 coding upstream 39941 21586978 ~ 21594470 (-)
LOC118944069 LOC106605559 coding upstream 48199 21595236 ~ 21596535 (-)
LOC110534450 LOC106605556 coding upstream 84353 21631390 ~ 21633645 (-)
G121754 NA non-coding downstream 5057 21483135 ~ 21485499 (-)
G121739 NA non-coding downstream 27285 21463050 ~ 21463271 (-)
G121575 NA non-coding downstream 55363 21383008 ~ 21435193 (-)
G121584 NA non-coding downstream 67165 21408505 ~ 21423391 (-)
G121590 NA non-coding downstream 73609 21416552 ~ 21416947 (-)
G121826 NA non-coding upstream 82731 21629768 ~ 21663939 (-)
G121848 NA non-coding upstream 121182 21668219 ~ 21671696 (-)
G121851 NA non-coding upstream 125751 21672788 ~ 21673005 (-)
G121847 LOC106605554 non-coding upstream 126917 21673954 ~ 21676881 (-)
G121738 NA other downstream 27526 21462693 ~ 21463030 (-)
G121533 LOC106583873 other downstream 143869 21288616 ~ 21346687 (-)
G121421 LOC106576258 other downstream 431707 21056598 ~ 21058849 (-)
G121208 NA other downstream 862856 20626557 ~ 20627700 (-)
G121188 NA other downstream 989969 20498896 ~ 20500587 (-)
G122733 LOC106592382 other upstream 249470 21796507 ~ 21812432 (-)
G122761 LOC106578847 other upstream 304396 21851433 ~ 21856413 (-)
G122829 LOC106605673 other upstream 479262 22026299 ~ 22027717 (-)
LOC110537842 NA other upstream 573543 22120579 ~ 22157534 (-)
G122972 NA other upstream 829116 22376153 ~ 22378160 (-)

Expression


Co-expression Network