G121727


Basic Information

Item Value
gene id G121727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21667411 ~ 21667706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU140584
gggggctagggtcagtttgttatatctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttctctaattctctccttctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggactacctgacatcatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140584 True 296 lncRNA 0.40 1 21667411 21667706

Neighbor

gene id symbol gene type direction distance location
LOC110537595 LOC106605558 coding upstream 97048 21555905 ~ 21570363 (+)
LOC118938333 LOC106605563 coding upstream 120373 21532987 ~ 21547038 (+)
LOC118944067 LOC106597946 coding upstream 134398 21531248 ~ 21533013 (+)
LOC110534436 LOC106605563 coding upstream 136518 21512340 ~ 21530893 (+)
LOC110537581 LOC106605559 coding upstream 176053 21477642 ~ 21491358 (+)
LOC110537622 LOC106605554 coding downstream 3784 21671490 ~ 21676920 (+)
LOC110514317 LOC106578808 coding downstream 30589 21698295 ~ 21704763 (+)
LOC110537629 LOC106578808 coding downstream 37558 21705264 ~ 21708361 (+)
LOC110537775 LOC106605724 coding downstream 69043 21736749 ~ 21742169 (+)
LOC110537646 LOC106574911 coding downstream 89587 21757293 ~ 21804410 (+)
G121726 NA non-coding upstream 237 21666283 ~ 21667174 (+)
G121676 NA non-coding upstream 72768 21586591 ~ 21594643 (+)
G121616 NA non-coding upstream 119047 21475814 ~ 21548364 (+)
G121624 NA non-coding upstream 121517 21486971 ~ 21545894 (+)
G121618 NA non-coding upstream 202600 21464429 ~ 21464811 (+)
G121732 NA non-coding downstream 4695 21672401 ~ 21672730 (+)
G121861 NA non-coding downstream 14843 21682549 ~ 21682813 (+)
G121866 NA non-coding downstream 16885 21684591 ~ 21684797 (+)
G121877 NA non-coding downstream 26055 21693761 ~ 21693976 (+)
G121884 NA non-coding downstream 28930 21696636 ~ 21697002 (+)
G121677 NA other upstream 81310 21585421 ~ 21586101 (+)
LOC110509768 LOC106576258 other upstream 651520 20990131 ~ 21058856 (+)
erfl3 LOC106576393 other upstream 691212 20900204 ~ 20977481 (+)
G120169 NA other upstream 1248283 20407862 ~ 20419128 (+)
LOC110537735 LOC106595974 other downstream 153508 21821165 ~ 21825285 (+)
G122030 NA other downstream 348956 22015130 ~ 22018815 (+)
LOC110537939 apoc1 other downstream 674821 22342491 ~ 22346615 (+)
apoc4 NA other downstream 680877 22348543 ~ 22349936 (+)
G122459 LOC106578191 other downstream 1143061 22810767 ~ 22811263 (+)

Expression


Co-expression Network