XLOC_021010


Basic Information

Item Value
gene id XLOC_021010
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 14880815 ~ 14883529 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042368
cagagatggattgccgctggaagggcatctgctgcgttaaacatatgctggataagttcaatccactgtggccaccccagattaataaagggactaagccgaaaagaaaattaatgaatgaacaggtCATTCCAGGTATTCAACCAACATTAGGGGCTTTTGTGTCACAGGTACTTGGTTATAGGAACTAACCACAAGGAATGTCCCCTGAGAACTAAAAGTTCCCCTCAGGCTGCATTTGTAACTCTGAATGTGATGTATACCAGGTAAGAGCAACATCAAGCGTgacacaagaagaaaaaaaatcaataactaGAGGATGAATGATGCCATGATCGAATGTGTTCTTGTTGTGTGCTATGGATTTCGTAAGAACCCAGTTGAAACGTAAACGTGTAAAATTACGTGGCTTAAAGAAAAAAAGGGACAAAATTAGATGTGACAACTTGTAGTTCTACAAATCAATGAGGCTAAGAAAAGAACATAATTCCAACAAGGGTGACAGGTACAGTAAACACTGCTTACATTGTACAACAACTCATGCCTCTTTGGGGTGgcattgaataaatatatattccaTATATCCTACATTTTGGGTTCTTAGGGGCTGTGAACACTCCTTGGTCATGCATGGCTGCCTGCCTCACTAAGCTGTTTTCAAAATAGGAGTCCCAGGTACTTGGGCTACCAATGCGCGTCTACTTTCTGCCCTTCATTCGTCAATCTGCCTTCGTTTTGTCAGCAATGTTCATCTTCCAATGGTCCAATCAGTTCCCAATGGACAAAATCATGCACCGCTACTCATGAAGAGGACTGTTTCAATTCGATGTCATGATATCGAAAAAAAGGGACTATCTTTATGTTGGTTtcatgatgtttttattttataaacaatctCAACCTGCACAGACAACGTTCAACATGGCCAGTTTTTACCAGCTAGAAAAATCATACGGCTTGGAACAGCATGGGGGTTAGTAAACGATTTCATTTTaaggtgaaccatccctttaagagcTGCTGGTACCAATTATAATTCAACCTTTTAACTCCTGTCTTGTTTTTCTCTTCCAGCGTCTGTTTTCTAGCCTTGTTTTTGTCTGATGTCCTCCAGTCTTATCTCGCTccatgtgtgtgtctctctcctCTGACTAGAAGAGTATTCTGGGTATTTTTCTTCATGTTCTCAGTACAGCCACATGGGCTCCTCTCTTGCTGTCTCTGTCTAGTAATCACACAGACCAGATTAGTTCCCCAGTGACTTGTGCCTCAGATCAGATCTGAGGCTTATATTTGATTCTGAGAGAATGTAATGGCCACTGAAAGTGAGAGAGAATCCTCTCGGTTATCTGAAGGCAGcgtgtgaaaaacatatgctgatattCAAAgaaagatgtttaaaaaaatcgaC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042368 True 1411 lncRNA 0.41 2 14880815 14883529

Neighbor

gene id symbol gene type direction distance location
XLOC_021009 BX936391.1 coding downstream 93753 14764998 ~ 14787062 (-)
XLOC_021007 lrp1ba coding downstream 141324 14363952 ~ 14739491 (-)
XLOC_021008 CR352252.1 coding downstream 187587 14693112 ~ 14693228 (-)
XLOC_021006 si:dkeyp-122a9.2 coding downstream 519793 14350839 ~ 14361022 (-)
XLOC_021005 si:dkeyp-122a9.1 coding downstream 534240 14338178 ~ 14346575 (-)
XLOC_021011 elfn2a coding upstream 125639 15009168 ~ 15010688 (-)
XLOC_021012 NA coding upstream 188125 15071654 ~ 15209243 (-)
XLOC_021013 NA coding upstream 270615 15154144 ~ 15155315 (-)
XLOC_021014 mfng coding upstream 367998 15251527 ~ 15280638 (-)
XLOC_021015 tmem264 coding upstream 500927 15384456 ~ 15385442 (-)
XLOC_021004 NA non-coding downstream 546680 14332450 ~ 14334135 (-)
XLOC_021002 NA non-coding downstream 578942 14299800 ~ 14301873 (-)
XLOC_021001 NA non-coding downstream 582213 14275746 ~ 14298602 (-)
XLOC_021016 NA non-coding upstream 513893 15397422 ~ 15400404 (-)
XLOC_021025 NA non-coding upstream 851361 15734890 ~ 15748895 (-)
XLOC_021026 NA non-coding upstream 877012 15760541 ~ 15788900 (-)

Expression


Co-expression Network