Gene
RNA
| Item | Value |
|---|---|
| gene id | G121898 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 21709313 ~ 21710578 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140792 | True | 1266 | lncRNA | 0.45 | 1 | 21709313 | 21710578 |
21,708,000
21,708,400
21,708,800
21,709,200
21,709,600
21,710,000
21,710,400
21,710,800
21,711,200
21,711,600
21,712,000
21,712,400
21,712,800
21,713,200
21,713,600
21,714,000
21,714,400
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537629 | LOC106578808 | coding | upstream | 952 | 21705264 ~ 21708361 (+) |
| LOC110514317 | LOC106578808 | coding | upstream | 4550 | 21698295 ~ 21704763 (+) |
| LOC110537622 | LOC106605554 | coding | upstream | 32393 | 21671490 ~ 21676920 (+) |
| LOC110537595 | LOC106605558 | coding | upstream | 138950 | 21555905 ~ 21570363 (+) |
| LOC118938333 | LOC106605563 | coding | upstream | 162275 | 21532987 ~ 21547038 (+) |
| LOC110537775 | LOC106605724 | coding | downstream | 26171 | 21736749 ~ 21742169 (+) |
| LOC110537646 | LOC106574911 | coding | downstream | 46715 | 21757293 ~ 21804410 (+) |
| LOC110537766 | LOC106592382 | coding | downstream | 82946 | 21793524 ~ 21799614 (+) |
| LOC110537864 | LOC106605571 | coding | downstream | 90754 | 21801332 ~ 21803861 (+) |
| LOC110537743 | LOC106605572 | coding | downstream | 95033 | 21805611 ~ 21812352 (+) |
| G121884 | NA | non-coding | upstream | 12311 | 21696636 ~ 21697002 (+) |
| G121877 | NA | non-coding | upstream | 15337 | 21693761 ~ 21693976 (+) |
| G121866 | NA | non-coding | upstream | 24516 | 21684591 ~ 21684797 (+) |
| G121861 | NA | non-coding | upstream | 26500 | 21682549 ~ 21682813 (+) |
| G121732 | NA | non-coding | upstream | 36583 | 21672401 ~ 21672730 (+) |
| G121897 | NA | non-coding | downstream | 1010 | 21711588 ~ 21712136 (+) |
| G121920 | NA | non-coding | downstream | 17896 | 21728474 ~ 21728737 (+) |
| G121930 | NA | non-coding | downstream | 87773 | 21798351 ~ 21812247 (+) |
| LOC110537720 | LOC106578847 | non-coding | downstream | 138796 | 21849271 ~ 21853703 (+) |
| G121677 | NA | other | upstream | 123212 | 21585421 ~ 21586101 (+) |
| LOC110509768 | LOC106576258 | other | upstream | 693422 | 20990131 ~ 21058856 (+) |
| erfl3 | LOC106576393 | other | upstream | 733114 | 20900204 ~ 20977481 (+) |
| G120169 | NA | other | upstream | 1290185 | 20407862 ~ 20419128 (+) |
| LOC110537735 | LOC106595974 | other | downstream | 110636 | 21821165 ~ 21825285 (+) |
| G122030 | NA | other | downstream | 306084 | 22015130 ~ 22018815 (+) |
| LOC110537939 | apoc1 | other | downstream | 631949 | 22342491 ~ 22346615 (+) |
| apoc4 | NA | other | downstream | 638005 | 22348543 ~ 22349936 (+) |
| G122459 | LOC106578191 | other | downstream | 1100189 | 22810767 ~ 22811263 (+) |
