G122692



Basic Information


Item Value
gene id G122692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21733780 ~ 21734251 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU141726
ggggtatgtctctctctataagcttggcacatctagccactgggatttttgcccattcttcaaggtaaaactgctccagctccttcaagttggatgggttccgctggtgtacagcaatctttaagtcataccacagattctcaattggattgaggtctgggctttgactaggccattccaagacatttaaatgttttcccttaaaccactcaagtgttgctttagcagtatgcttagggtcattgtcctgctggaaggtgaaccgctttcccagtctcaaatctcaaGACTGAAACAGggttccctcaagaatttccctgtatatagcgccatccatcattccatcaactctgaccagtttcccagtccctgccaatgaaaaacatccccacagcatgatgctgccaccaccacgcttcgtgttctcggggtgatgagaggtgttgggtttgcgccagacatagcgtttttc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU141726 True 472 lncRNA 0.47 1 21733780 21734251

Neighbor


gene id symbol gene type direction distance location
LOC110537643 LOC106605567 coding downstream 12145 21713005 ~ 21721635 (-)
cnfn LOC106605555 coding downstream 86294 21645294 ~ 21647486 (-)
LOC110534450 LOC106605556 coding downstream 100135 21631390 ~ 21633645 (-)
LOC118944069 LOC106605559 coding downstream 137245 21595236 ~ 21596535 (-)
LOC110534443 LOC106605563 coding downstream 139310 21586978 ~ 21594470 (-)
LOC110537847 mrpl17 coding upstream 381398 22114700 ~ 22118083 (-)
LOC110537842 NA coding upstream 386328 22120579 ~ 22157534 (-)
LOC110537803 LOC106577461 coding upstream 438441 22172692 ~ 22175353 (-)
LOC110537752 LOC106577440 coding upstream 447594 22180756 ~ 22198840 (-)
LOC110537877 LOC106577478 coding upstream 495549 22229800 ~ 22234924 (-)
G121899 NA non-coding downstream 23686 21709604 ~ 21710094 (-)
G121892 LOC106605553 non-coding downstream 24724 21701853 ~ 21709056 (-)
G121886 NA non-coding downstream 35241 21698138 ~ 21698539 (-)
G121873 NA non-coding downstream 45112 21688444 ~ 21688668 (-)
G121871 NA non-coding downstream 46499 21686867 ~ 21687281 (-)
G122696 NA non-coding upstream 9833 21744084 ~ 21744494 (-)
G122699 NA non-coding upstream 13290 21747541 ~ 21747811 (-)
G122700 NA non-coding upstream 13604 21747855 ~ 21818736 (-)
G122724 LOC106574911 non-coding upstream 42805 21777056 ~ 21777725 (-)
G122737 LOC106574911 non-coding upstream 48761 21783012 ~ 21783631 (-)
G121756 NA other downstream 186743 21490267 ~ 21547037 (-)
G121738 NA other downstream 270750 21462693 ~ 21463030 (-)
G121533 LOC106583873 other downstream 387093 21288616 ~ 21346687 (-)
G121421 LOC106576258 other downstream 674931 21056598 ~ 21058849 (-)
G121208 NA other downstream 1106080 20626557 ~ 20627700 (-)
G122733 LOC106592382 other upstream 62256 21796507 ~ 21812432 (-)
G122761 LOC106578847 other upstream 117182 21851433 ~ 21856413 (-)
G122829 LOC106605673 other upstream 292048 22026299 ~ 22027717 (-)
G122972 NA other upstream 641902 22376153 ~ 22378160 (-)

Expression



Co-expression Network