G122733 (LOC106592382)


Basic Information

Item Value
gene id G122733
gene name LOC106592382
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21796507 ~ 21812432 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU141778
AACCAGCCGTGagcgggagtcccatagggcggcgtacaattggccagcattgtccgggttaggggagagtttggccgtcaatgtaaaataagaatttgttctttactgacttgtctagttaaaagGTTAAATAATCAAAGATCACAACAAAAAAGCAATACAGGCTTCTGGACTGAAACAAATGTGGTCTCTATGTaattaactttaattaaatggCATGTTTATAACAATAGTATCAGAGTTACCTTTACATAAATTATCCTCTTGTTCCAAATCAAGGAATATACTACAAACACAAAGCAAAGAAAACTGACGATCTTTCAGAATTTATTATCGCCTACTGATCATCAGGACAATCAGTCATGAAACCATCTGAGcaaattaaaaaaatgaaataaactgGTGTTTATAACCTCTTAGACATAAGGTCCCTTGTTTGGGTGGTTCTGGTACCGGTTCCGACCCTGCGTAATGTAGGATGTGAAATCTAacaccacttgaagctgggatgtccctTCTACCATTTCAATCACTCTTCCAACTGTCcaactcctggctgaaccctATATCACAGCTACTGACAAAGCACATGCCTGCAATCCTTACATCATAGCGCAGTAGGAGAGTGGTTTCATTACAGTAGCACATTCAGAGATGGATTTATAGCCAATAATCTAAAACAAttaatagattttaaacaaaaaaGATTAACATGGAGAGTTCCTAACGAGTTCATGAAGGCAATCTAGAGCGCTGTGAAATTTCCACAGCGATGGGGGCAAACACTTTGATCAAGAGAAACCTGTAGAAAATATGCACGCTCTTtaacactaaacatacaaatatgaTATTTACAGTTATGAGGTGAACTCGTCATTTTATAATTTATTTATGCTATATTTAGAAAGCACATAAGTCATTTCAAGCATTATTCATACAATTTTGTTGAAAAGGAAATCCATAACATATTTGTACTGCGTACTTGAGCCCTCAAAATTGACCTCAGCCATTTAACTTCAATTTTTTGACCAGAAGTGAGATTACCTTTCTTTGAGTATGCAACATTACTAGTTATCATTTATGGCCCTCATGATAACTACTTGTAGGGATTATGTAGCTTACATTGAACTGGTTAAACATCCATAAAACAAAAGAGCAATAATATTAACAAaagagctccaaaagtattggggcaGTGAAttatgttttgttattttggcTCTGTACCTCCAgactttgaaatgatacaatgattaTTAGGTTAAAGTGTAGACAGTCAGctttaatttgtatttttatcCATATGAACAGTTTAGAAATTACACTTTttgaaaaggggggagggggggactgAAAGAATTGGTACAAATTCCCTGTGTggtaaaagtagtcaaaagtgtagtatttggtcccattgTCCTAGCACATATGGATTACAACAAGGTTGttactctacaaacttgttggatgctaCAATGATTACGGATAGTCGTGAATAATAAGTGAGAAAGCTAGAGTACAGACACACAAGTATCAtgcccaagacatgctaacatcttaccattacaataacaggggaggttagcattttgagggggtatgatatttatgcttCTAACTTTCACTCATTAATCACAATTCATTCAGttttatccgtaatcatggtagccaCTAAAATAGAAGAAAACATACACTATTCTaatttataataaaagtgacaatacattatttaccatgaaTTTCTATTGAGCACAAAATACTCTgacacacaaccaaaacaaacagcaaacgcATCCAGTCAAGCTTAATGTAAGCATTGCATGctgggaatatgggaccaaaccaTTTAACCATTCCCTTAAAAATGGGGGGGAATATGTACAAAAAATCCTGTTCTTTCTAagcggttcacccgatatggatgaaaataccctcaaattaaagcggAGTCTGAACTTTAACCTCAGTCgttgtataatttcaaatccaaagtgctgcaGGAGAAACAAaacgtgtcactgtcccaatacatgGAGCTCACTGTGACCCAACTGGAGGATTGTTAGAACATTGCAGCGTTATCATAAACATGGGGCAAAATTTAGTTAGAATTTGATGTCACACATCGATCACTGACAAAAGAGATCAGACTCCCCTCCATTTAATTCATAAGAGTAACAGTTTCATAAAAGGTGTTATGTTAATATACATCATTATCATTTAGGTTTATGACGTCTAAGCAGGTGTTTGGAGAGGTTGGACTTGCGAGCAAAGCTGAGAAAGCAGTGGGGGCAGGAATAACGTTTCCCCTTGTGGATTTTCATGTGGCCGTTCACATGACTCTGTTCAtaaaagctcttcccacactctTGGCAGGAGTATGGCTTTACGTCACGGTGAGTGTGGGTCCTCATGTGCAGGGTCAGAGAAGCAGAGCAGATAAAGCGTTTGTGGCATTCAGAACATTCAAATGGCCTCTCCCCAGTGTGGAGGCGCTTGTGTTTGGTTAGATCTCCAGACTGAGTGAAGCTTTTACCGCACTCGGTACAGGTGTATGGTTTCTCACCTGTGTGAGTGCGCTGGTGGTTCTTCAGGTGGTCGAGTCGGGCAAACTGCTTGTCACACACTGTGCAATGGTAAGGCCTCTCACCGGTGTGTGAGCGCAGGTGTACGTTCAGCACCCCAATCCTTATGAATTTCTGCCCACAAACCCCACAATGGTAGTTTTTCTGGTTGTTGTGGATCTTCAGATGCATCTTCAGATAACCTTTGTCAGCAAAGTCTTTACCACAGACAGTACATTTGAAAGGTCTCGCCCCGGAGTGTGTGCGCAGGTGAAGCTTCAGACTCTCCCTGTATGCAAACTGCCTGTCGCATTGGGAGCAGGAGTACTTCCTCTCACCAGAGTGAACAGTCATGTGCTTCCTGAGGAGGTACTTCTGCTTGAAAGCCTTCCCACAGTCCTGACATTTGAATGGAATGACCCCATTGTGTATTAACAAGTGATAATGGTAAGCGCCTGTACCTGAGAAGCGCTTGCCACACTCTTTGCAGACAAAAGGCTTTTCTCCAGTGTGGATGCGCATGTGATTGTTCAGGCTCGTAGGAGTAGTGAGGATCTTGCCACAATCTAAGCATTGGAAGCCGACTTCCTTAATGACCATCTGTTTAGCGTCCTTCGGTTTATTGCCCTCTGGTTCGTGACACCGGTGAGGCCCCAGGCCCCAGCAATTCTCAAAGCTCTTCTCACAGTCTGCGCAACTGATGTGTCCATTGGTGAGAACAACAGCCATTTTGTGCAAACTCTTGCAGTGCTTCAGCAGGCTGCCCAGGTACTTGAATCTGCGGGAGCACTGTGGGCAGGTGTGGAATTTCTCCTGTACCCTGTGGGGACGGCCAGTTCTCCGGGGAGGGGCAGGTTTCTGGGGACGGGCAGAGGGGTGGGCCTGGCGGGTGTGGATGTCTAGCTGTCGTGGTGTATGGAACATGCAGCTACAGTGGGCACAGCTGTGTGTGGGGCCGTACACTCTTTTACTCTTTGAGACTTGGCTTCTCAACATGGCCAGGTACTGCTTCTGGTGTTTGGTCTTGATGTGGTTCTCCAggaagtaacagtcagtaaagGAGATGGTGCA

Function

NR:

description
gastrula zinc finger protein XlCGF57.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141778 True 3635 TUCP 0.42 2 21796507 21812432

Neighbor

gene id symbol gene type direction distance location
LOC110537643 LOC106605567 coding downstream 74872 21713005 ~ 21721635 (-)
cnfn LOC106605555 coding downstream 149021 21645294 ~ 21647486 (-)
LOC110534450 LOC106605556 coding downstream 162862 21631390 ~ 21633645 (-)
LOC118944069 LOC106605559 coding downstream 199972 21595236 ~ 21596535 (-)
LOC110534443 LOC106605563 coding downstream 202037 21586978 ~ 21594470 (-)
LOC110537847 mrpl17 coding upstream 303217 22114700 ~ 22118083 (-)
LOC110537842 NA coding upstream 308147 22120579 ~ 22157534 (-)
LOC110537803 LOC106577461 coding upstream 360260 22172692 ~ 22175353 (-)
LOC110537752 LOC106577440 coding upstream 369413 22180756 ~ 22198840 (-)
LOC110537877 LOC106577478 coding upstream 417368 22229800 ~ 22234924 (-)
G122742 NA non-coding downstream 8999 21786955 ~ 21787508 (-)
G122737 LOC106574911 non-coding downstream 12876 21783012 ~ 21783631 (-)
G122724 LOC106574911 non-coding downstream 18782 21777056 ~ 21777725 (-)
G122699 NA non-coding downstream 48696 21747541 ~ 21747811 (-)
G122696 NA non-coding downstream 52013 21744084 ~ 21744494 (-)
G122731 LOC106605715 non-coding upstream 23763 21836195 ~ 21836733 (-)
G122761 LOC106578847 non-coding upstream 39197 21851433 ~ 21856413 (-)
G122762 NA non-coding upstream 44421 21856853 ~ 21857093 (-)
G122795 NA non-coding upstream 81699 21894131 ~ 21894461 (-)
G122833 NA non-coding upstream 153293 21965725 ~ 22029572 (-)
G121756 NA other downstream 249470 21490267 ~ 21547037 (-)
G121738 NA other downstream 333477 21462693 ~ 21463030 (-)
G121533 LOC106583873 other downstream 449820 21288616 ~ 21346687 (-)
G121421 LOC106576258 other downstream 737658 21056598 ~ 21058849 (-)
G121208 NA other downstream 1168807 20626557 ~ 20627700 (-)
G122829 LOC106605673 other upstream 213867 22026299 ~ 22027717 (-)
G122972 NA other upstream 563721 22376153 ~ 22378160 (-)
G123308 NA other upstream 1192554 23004986 ~ 23005812 (-)

Expression


Co-expression Network