XLOC_021012



Basic Information


Item Value
gene id XLOC_021012
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 15071654 ~ 15209243 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042369
CCCGTGTCTCCGTCGGTCTGAGTCCTCAGCGCTGGCAAGGGATAATAAACTGCCTTTCCGCAGCAATACGTGGTCAAAGGAGCAGCCCACGAAAGAGTGGACTTTCACAGACGATTTGGGTGTTTTGAAGTGGGTGAAGCTGTTATTGTGACAACATACAGTACCTTTGGATCTGAAAAGAAGAAAGGAGCATTCGGAATCATCAAAAAGTGACCATACAGAGAGGAGAGTAAACATGTCATCCTGAATCCTGATTTATCAGAGTCTAAAGTGAAGGAGCAGTTCTTGGGCCTGTAGGTGGCTGGAGTATTGCCAATCACGACTGGAAGACGGAAAGAaaggagggagagagggaggaaTAGAAGATAAGCGCGAGGATCTTTACATTGGACTCTGTTGATGCGCAGAAAATGGTGGgttgacgcacacacacacactcacacacacactgattcgcACAATGACAGATAAACGTGCACAGACTCATTATAAAGCAACAAGAGCACATAGCCTTGCGTTGTGTTGAGCGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042369 True 530 lncRNA 0.47 3 15071654 15209243

Neighbor


gene id symbol gene type direction distance location
XLOC_021011 elfn2a coding downstream 60966 15009168 ~ 15010688 (-)
XLOC_021010 NA coding downstream 188125 14880815 ~ 14883529 (-)
XLOC_021009 BX936391.1 coding downstream 284592 14764998 ~ 14787062 (-)
XLOC_021007 lrp1ba coding downstream 332163 14363952 ~ 14739491 (-)
XLOC_021008 CR352252.1 coding downstream 378426 14693112 ~ 14693228 (-)
XLOC_021014 mfng coding upstream 42284 15251527 ~ 15280638 (-)
XLOC_021015 tmem264 coding upstream 175213 15384456 ~ 15385442 (-)
XLOC_021016 NA coding upstream 188179 15397422 ~ 15400404 (-)
XLOC_021017 rpp21 coding upstream 219856 15429099 ~ 15437242 (-)
XLOC_021018 ankmy1 coding upstream 342782 15552025 ~ 15562933 (-)
XLOC_021004 NA non-coding downstream 737519 14332450 ~ 14334135 (-)
XLOC_021002 NA non-coding downstream 769781 14299800 ~ 14301873 (-)
XLOC_021025 NA non-coding upstream 525647 15734890 ~ 15748895 (-)
XLOC_021026 NA non-coding upstream 551298 15760541 ~ 15788900 (-)
XLOC_021027 BX323550.2 non-coding upstream 572365 15781608 ~ 15781724 (-)
XLOC_021028 BX323550.3 non-coding upstream 572651 15781894 ~ 15782009 (-)

Expression



Co-expression Network