G121929


Basic Information

Item Value
gene id G121929
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21855962 ~ 21856420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU140833
agtgaagaggtgactccgggatgctggccttctaggcagagttgcaaagaaaaagccatatctcagactggtcaataaaagattgagatgggcaaaagaacacagacactggacagaggaactctgcctagaagggcagCATCCCGTAGTCGctgcttcactgttgacgttgagattggtgttttgcgggtactttttaatgaagctgccagttgaggacttgtgaggtgtctgtttctcaaagtaGACACACTAATGGACAAACaaatggcttttctttcaaaaacaaggacctttctaagtgaccccaaacttttgaacgatagtgtacaTTGTATTTATTCTAAATGATTAGGCAACTGTTATTATAAGAATGTGTCAATGACTTGTTATCTACTAAGTCATTACATTGACTAATAAATATGAACAACGTTAAGGCTGTTTAACCAAACCGTGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140833 True 459 lncRNA 0.41 1 21855962 21856420

Neighbor

gene id symbol gene type direction distance location
LOC110537720 LOC106578847 coding upstream 2259 21849271 ~ 21853703 (+)
LOC110537677 LOC106578847 coding upstream 7980 21834445 ~ 21847982 (+)
LOC110537735 LOC106595974 coding upstream 30677 21821165 ~ 21825285 (+)
LOC110537743 LOC106605572 coding upstream 43610 21805611 ~ 21812352 (+)
LOC110537864 LOC106605571 coding upstream 52101 21801332 ~ 21803861 (+)
LOC118938391 LOC106605706 coding downstream 46943 21903363 ~ 21966857 (+)
arhgef1b arhgef1 coding downstream 111258 21967678 ~ 22024337 (+)
LOC110537828 LOC106605673 coding downstream 167998 22024418 ~ 22029416 (+)
LOC110537667 LOC106577399 coding downstream 173643 22030063 ~ 22069249 (+)
LOC110537757 LOC106605699 coding downstream 221570 22077990 ~ 22115281 (+)
G121930 NA non-coding upstream 43715 21798351 ~ 21812247 (+)
LOC110537646 LOC106574911 non-coding upstream 51552 21757293 ~ 21804410 (+)
G121920 NA non-coding upstream 127225 21728474 ~ 21728737 (+)
G121897 NA non-coding upstream 143826 21711588 ~ 21712136 (+)
G121962 NA non-coding downstream 1890 21858310 ~ 21858797 (+)
G121986 NA non-coding downstream 37842 21894262 ~ 21894505 (+)
G121987 NA non-coding downstream 38239 21894659 ~ 21894882 (+)
G121989 NA non-coding downstream 40446 21896866 ~ 21897069 (+)
G121991 NA non-coding downstream 42977 21899397 ~ 21899615 (+)
G121677 NA other upstream 269861 21585421 ~ 21586101 (+)
LOC118938333 LOC106605563 other upstream 308928 21532987 ~ 21547038 (+)
LOC110509768 LOC106576258 other upstream 840071 20990131 ~ 21058856 (+)
erfl3 LOC106576393 other upstream 879763 20900204 ~ 20977481 (+)
G122030 NA other downstream 160242 22015130 ~ 22018815 (+)
LOC110537939 apoc1 other downstream 486107 22342491 ~ 22346615 (+)
apoc4 NA other downstream 492163 22348543 ~ 22349936 (+)
G122459 LOC106578191 other downstream 954347 22810767 ~ 22811263 (+)
G123980 NA other downstream 1968273 23824693 ~ 23825502 (+)

Expression


Co-expression Network