Gene
RNA
| Item | Value |
|---|---|
| gene id | G121962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 21858310 ~ 21858797 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140879 | True | 488 | lncRNA | 0.37 | 1 | 21858310 | 21858797 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537720 | LOC106578847 | coding | upstream | 4607 | 21849271 ~ 21853703 (+) |
| LOC110537677 | LOC106578847 | coding | upstream | 10328 | 21834445 ~ 21847982 (+) |
| LOC110537735 | LOC106595974 | coding | upstream | 33025 | 21821165 ~ 21825285 (+) |
| LOC110537743 | LOC106605572 | coding | upstream | 45958 | 21805611 ~ 21812352 (+) |
| LOC110537864 | LOC106605571 | coding | upstream | 54449 | 21801332 ~ 21803861 (+) |
| LOC118938391 | LOC106605706 | coding | downstream | 44566 | 21903363 ~ 21966857 (+) |
| arhgef1b | arhgef1 | coding | downstream | 108881 | 21967678 ~ 22024337 (+) |
| LOC110537828 | LOC106605673 | coding | downstream | 165621 | 22024418 ~ 22029416 (+) |
| LOC110537667 | LOC106577399 | coding | downstream | 171266 | 22030063 ~ 22069249 (+) |
| LOC110537757 | LOC106605699 | coding | downstream | 219193 | 22077990 ~ 22115281 (+) |
| G121929 | NA | non-coding | upstream | 1890 | 21855962 ~ 21856420 (+) |
| G121930 | NA | non-coding | upstream | 46063 | 21798351 ~ 21812247 (+) |
| LOC110537646 | LOC106574911 | non-coding | upstream | 53900 | 21757293 ~ 21804410 (+) |
| G121920 | NA | non-coding | upstream | 129573 | 21728474 ~ 21728737 (+) |
| G121986 | NA | non-coding | downstream | 35465 | 21894262 ~ 21894505 (+) |
| G121987 | NA | non-coding | downstream | 35862 | 21894659 ~ 21894882 (+) |
| G121989 | NA | non-coding | downstream | 38069 | 21896866 ~ 21897069 (+) |
| G121991 | NA | non-coding | downstream | 40600 | 21899397 ~ 21899615 (+) |
| G122022 | NA | non-coding | downstream | 99530 | 21958327 ~ 21958741 (+) |
| G121677 | NA | other | upstream | 272209 | 21585421 ~ 21586101 (+) |
| LOC118938333 | LOC106605563 | other | upstream | 311276 | 21532987 ~ 21547038 (+) |
| LOC110509768 | LOC106576258 | other | upstream | 842419 | 20990131 ~ 21058856 (+) |
| erfl3 | LOC106576393 | other | upstream | 882111 | 20900204 ~ 20977481 (+) |
| G122030 | NA | other | downstream | 157865 | 22015130 ~ 22018815 (+) |
| LOC110537939 | apoc1 | other | downstream | 483730 | 22342491 ~ 22346615 (+) |
| apoc4 | NA | other | downstream | 489786 | 22348543 ~ 22349936 (+) |
| G122459 | LOC106578191 | other | downstream | 951970 | 22810767 ~ 22811263 (+) |
| G123980 | NA | other | downstream | 1965896 | 23824693 ~ 23825502 (+) |
