G121989


Basic Information

Item Value
gene id G121989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21896866 ~ 21897069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU140908
caatgtaaatagcccgggtggccatttgattaattgttcagcagtcttatggcttgggggtagaagctgttaaggagccttttggacctagacgtggcgctctggtaccgattgccatgcggtaacagagagaacagtctatgacttgggtgactggagtctttgacaatttttggggctttcATCTGACAGgtcctattatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140908 True 204 lncRNA 0.47 1 21896866 21897069

Neighbor

gene id symbol gene type direction distance location
LOC110537720 LOC106578847 coding upstream 43163 21849271 ~ 21853703 (+)
LOC110537677 LOC106578847 coding upstream 48884 21834445 ~ 21847982 (+)
LOC110537735 LOC106595974 coding upstream 71581 21821165 ~ 21825285 (+)
LOC110537743 LOC106605572 coding upstream 84514 21805611 ~ 21812352 (+)
LOC110537864 LOC106605571 coding upstream 93005 21801332 ~ 21803861 (+)
LOC118938391 LOC106605706 coding downstream 6294 21903363 ~ 21966857 (+)
arhgef1b arhgef1 coding downstream 70609 21967678 ~ 22024337 (+)
LOC110537828 LOC106605673 coding downstream 127349 22024418 ~ 22029416 (+)
LOC110537667 LOC106577399 coding downstream 132994 22030063 ~ 22069249 (+)
LOC110537757 LOC106605699 coding downstream 180921 22077990 ~ 22115281 (+)
G121987 NA non-coding upstream 1984 21894659 ~ 21894882 (+)
G121986 NA non-coding upstream 2361 21894262 ~ 21894505 (+)
G121962 NA non-coding upstream 38069 21858310 ~ 21858797 (+)
G121929 NA non-coding upstream 40446 21855962 ~ 21856420 (+)
G121991 NA non-coding downstream 2328 21899397 ~ 21899615 (+)
G122022 NA non-coding downstream 61258 21958327 ~ 21958741 (+)
G122026 NA non-coding downstream 89862 21986931 ~ 21987624 (+)
G122030 NA non-coding downstream 118061 22015130 ~ 22018815 (+)
G121677 NA other upstream 310765 21585421 ~ 21586101 (+)
LOC118938333 LOC106605563 other upstream 349832 21532987 ~ 21547038 (+)
LOC110509768 LOC106576258 other upstream 880975 20990131 ~ 21058856 (+)
erfl3 LOC106576393 other upstream 920667 20900204 ~ 20977481 (+)
LOC110537939 apoc1 other downstream 445458 22342491 ~ 22346615 (+)
apoc4 NA other downstream 451514 22348543 ~ 22349936 (+)
G122459 LOC106578191 other downstream 913698 22810767 ~ 22811263 (+)
G123980 NA other downstream 1927624 23824693 ~ 23825502 (+)

Expression


Co-expression Network