XLOC_021013


Basic Information

Item Value
gene id XLOC_021013
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 15154144 ~ 15155315 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041948
caaatataaattaagtaattttaacGTCAAAGTCAAATGTATTCATATAAAGTAAATTTTCATAGTGAATGCTGAATAAACTGAAGAATTAACTGCTTTCACTAAATCAATGACTGATTGACCGACCATATATTGTCATAGTTGTGTGTTTATCAGTGGTCTTATAACTTTCCTGATAATGAAGCATATGATACTACTGATTACAGAAATGGCTTTACAGACCAACTAGCATAATTTGAGTAGCATTGAGGGAAGTTGTtcaaatttaaacataaaaaggTTCTATATTTGTCTCTGTAAGGTACATAAAACAGCAAATtacctggaggcattttcaagATGGTCGCCGAGTGTCTGACTTGCCTTAAAAAGGCTTCGGATAAAAGCACAAGCTAAATGCAAGATATCTAATTCATTATGTATTAGAATGTATAATGGTATAAAATGGGCTATAGAGTGGCAGGAGGTCTGAGTACAGCCTAACAGCAAGGAATGCACATGCAGAGGTATCCGCCAAGACGCGCACACACACTGGCTTACAGAGCAAGACACCGGCTGTCACAACACAATAATGCAAGCAAGAGAAAGGCCACAACACAAGTCATGAGGGAGCGAGAGAGAGGGCAGCAGAGGTCACGTCTGGGGAATAAAAGCCATACAAAAAGCTTTGCTCATGTAGGAATTGATTTCACATTCTTGTATGACTgccaagcaagaaaaaaaaaaccctaagaATAGAGTTGTTTTTCTTAAGGTCCCTGTTGGAACAGGACAGTGCAGAGACTgtgacataaacacacacacccatacatatATCCTGAAAATGAAACCATTACTCATAGCATATTAAACTTTGGCACATTACTTGCCCCATACTGTTTGTGCTGCGAACATCAATAATACCTTAAACTGTGTGGCTTGTTGAGCGCAGATGTGCCTTAAAAGGGGCTACTATGGACAATCTTACTATggatgccaatggttacaggtttttagctttctttaaaatatattatttcaagagttcacacctagctgatgatttataataagcttgtttagcatgctgtcccgggagagaaacCCTGaactcaagggatcctcgagccaaGGCCTCCCTCCCATTTACAGGACTAGGGAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041948 True 1142 lncRNA 0.39 2 15154144 15155315

Neighbor

gene id symbol gene type direction distance location
XLOC_021011 elfn2a coding downstream 143456 15009168 ~ 15010688 (-)
XLOC_021010 NA coding downstream 270615 14880815 ~ 14883529 (-)
XLOC_021009 BX936391.1 coding downstream 367082 14764998 ~ 14787062 (-)
XLOC_021007 lrp1ba coding downstream 414653 14363952 ~ 14739491 (-)
XLOC_021014 mfng coding upstream 96212 15251527 ~ 15280638 (-)
XLOC_021015 tmem264 coding upstream 229141 15384456 ~ 15385442 (-)
XLOC_021016 NA coding upstream 242107 15397422 ~ 15400404 (-)
XLOC_021017 rpp21 coding upstream 273784 15429099 ~ 15437242 (-)
XLOC_021018 ankmy1 coding upstream 396710 15552025 ~ 15562933 (-)
XLOC_021008 CR352252.1 non-coding downstream 460916 14693112 ~ 14693228 (-)
XLOC_021004 NA non-coding downstream 820009 14332450 ~ 14334135 (-)
XLOC_021002 NA non-coding downstream 852271 14299800 ~ 14301873 (-)
XLOC_021025 NA non-coding upstream 579575 15734890 ~ 15748895 (-)
XLOC_021026 NA non-coding upstream 605226 15760541 ~ 15788900 (-)
XLOC_021027 BX323550.2 non-coding upstream 626293 15781608 ~ 15781724 (-)
XLOC_021028 BX323550.3 non-coding upstream 626579 15781894 ~ 15782009 (-)

Expression


Co-expression Network