Gene
RNA
| Item | Value |
|---|---|
| gene id | G122915 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22150272 ~ 22156271 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: trypsin isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142004 | True | 219 | lncRNA | 0.38 | 2 | 22150272 | 22156271 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537842 | NA | coding | downstream | 22724 | 22120579 ~ 22157534 (-) |
| LOC110537847 | mrpl17 | coding | downstream | 32189 | 22114700 ~ 22118083 (-) |
| LOC110537643 | LOC106605567 | coding | downstream | 428637 | 21713005 ~ 21721635 (-) |
| cnfn | LOC106605555 | coding | downstream | 502786 | 21645294 ~ 21647486 (-) |
| LOC110534450 | LOC106605556 | coding | downstream | 516627 | 21631390 ~ 21633645 (-) |
| LOC110537803 | LOC106577461 | coding | upstream | 16421 | 22172692 ~ 22175353 (-) |
| LOC110537752 | LOC106577440 | coding | upstream | 25574 | 22180756 ~ 22198840 (-) |
| LOC110537877 | LOC106577478 | coding | upstream | 73529 | 22229800 ~ 22234924 (-) |
| LOC110537882 | LOC106577487 | coding | upstream | 80557 | 22236828 ~ 22253486 (-) |
| LOC110537898 | LOC106605692 | coding | upstream | 158180 | 22314451 ~ 22316068 (-) |
| G122909 | NA | non-coding | downstream | 45872 | 22103168 ~ 22104400 (-) |
| G122860 | LOC106584637 | non-coding | downstream | 94135 | 22051423 ~ 22056137 (-) |
| G122849 | NA | non-coding | downstream | 134985 | 22014720 ~ 22015287 (-) |
| G122891 | NA | non-coding | upstream | 23720 | 22179991 ~ 22180399 (-) |
| G122973 | NA | non-coding | upstream | 186340 | 22342611 ~ 22346628 (-) |
| G122967 | apoa2 | non-coding | upstream | 198314 | 22354585 ~ 22356072 (-) |
| G123044 | NA | non-coding | upstream | 227875 | 22384146 ~ 22384796 (-) |
| G122829 | LOC106605673 | other | downstream | 122555 | 22026299 ~ 22027717 (-) |
| G122761 | LOC106578847 | other | downstream | 294371 | 21851433 ~ 21856413 (-) |
| G122733 | LOC106592382 | other | downstream | 337840 | 21796507 ~ 21812432 (-) |
| G121756 | NA | other | downstream | 603235 | 21490267 ~ 21547037 (-) |
| G121738 | NA | other | downstream | 687242 | 21462693 ~ 21463030 (-) |
| G122972 | NA | other | upstream | 219882 | 22376153 ~ 22378160 (-) |
| G123308 | NA | other | upstream | 848715 | 23004986 ~ 23005812 (-) |
| G123435 | NA | other | upstream | 1029369 | 23185640 ~ 23199252 (-) |
| LOC110538355 | LOC106577931 | other | upstream | 1123908 | 23279116 ~ 23281851 (-) |
| G124840 | NA | other | upstream | 1747568 | 23903839 ~ 23904677 (-) |
