G122891



Basic Information


Item Value
gene id G122891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22179991 ~ 22180399 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU141968
TTGTACCAGCAGTGAGCGACAGAGAGCACCCACTGCTCATTGATGAGCACGGCTCCGCAGAAGTGGTACCCGTAGTTGAGGGAGGCCATCCAGGGTCGGGAGTGAGGTTCACACTCCTGGCCACCGATGATCTTACCATCCTCACGGGGCACTGCcgctgaaacacacagagagagacaccataCAGAGAGAGTGGTCAcaagaggggagagatgaggacaTTGTTGCTCTACCTCACATAGAAACAGCCTGTTTAGTAAAAACGTTGAAAGCTCTTATAAGCTATATGTAAGATTAATATTCCCTACAAATAGTTTGTGATATATAATTGGTAGAGTATATtaaagtactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


NR:

description
trypsin-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU141968 True 382 lncRNA 0.47 2 22179991 22180399

Neighbor


gene id symbol gene type direction distance location
LOC110537803 LOC106577461 coding downstream 4638 22172692 ~ 22175353 (-)
LOC110537842 NA coding downstream 52443 22120579 ~ 22157534 (-)
LOC110537847 mrpl17 coding downstream 61908 22114700 ~ 22118083 (-)
LOC110537643 LOC106605567 coding downstream 458356 21713005 ~ 21721635 (-)
cnfn LOC106605555 coding downstream 532505 21645294 ~ 21647486 (-)
LOC110537752 LOC106577440 coding upstream 1446 22180756 ~ 22198840 (-)
LOC110537877 LOC106577478 coding upstream 49401 22229800 ~ 22234924 (-)
LOC110537882 LOC106577487 coding upstream 56429 22236828 ~ 22253486 (-)
LOC110537898 LOC106605692 coding upstream 134052 22314451 ~ 22316068 (-)
bcam LOC106577531 coding upstream 219258 22399657 ~ 22499146 (-)
G122915 NA non-coding downstream 23720 22150272 ~ 22156271 (-)
G122914 NA non-coding downstream 24056 22149927 ~ 22155935 (-)
G122909 NA non-coding downstream 75591 22103168 ~ 22104400 (-)
G122973 NA non-coding upstream 162212 22342611 ~ 22346628 (-)
G122967 apoa2 non-coding upstream 174186 22354585 ~ 22356072 (-)
G123044 NA non-coding upstream 203747 22384146 ~ 22384796 (-)
G123088 NA non-coding upstream 293055 22473454 ~ 22474204 (-)
G122829 LOC106605673 other downstream 152274 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 324090 21851433 ~ 21856413 (-)
G122733 LOC106592382 other downstream 367559 21796507 ~ 21812432 (-)
G121756 NA other downstream 632954 21490267 ~ 21547037 (-)
G122972 NA other upstream 195754 22376153 ~ 22378160 (-)
G123308 NA other upstream 824587 23004986 ~ 23005812 (-)
G123435 NA other upstream 1005241 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 1099780 23279116 ~ 23281851 (-)
G124840 NA other upstream 1723440 23903839 ~ 23904677 (-)

Expression



Co-expression Network