G123158


Basic Information

Item Value
gene id G123158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22636042 ~ 22660713 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU142274
tgttctgtacctacatttataaagtggagctggactgttctgtactggactgttctgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtactggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaaatGGAGCTGGTCTGTTCTGTACCTaaatttataaagtggagctgggctgttctgtacctacatttataaagtggagctggactgttctgttctgtacactacatttataaagtggagctggactgtctgtgcctacatttataaagtggagctggaatgtctgtgcctacatttataaagtggagctggactgtctgtgcctacatttataaagtggagctggactgtctgtacCTACATtcataaagtggagctggactgtctgtgcctacatttataa
>TU142276
tggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtatctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggtctgttctgtactggactgttctgtacctacatttataaagtggagctggactgttctgtactggactgttctgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtactggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaagtggagctggactgttctgtacctacatttataaaatGGAGCTGGTCTGTTCTGTACCTaaatttataaagtggagctgggctgttctgtacctacatttataaagtggagctggactgttctgttctgtacactacatttataaagtggagctggactgtctgtgcctacatttataaagtggagctggaatgtctgtgcctacatttataaagtggagctggactgtctgtgcctacatttataaagtggagctggactgtctgtacCTACATtcataaagtggagctggactgtctgtgcctacatttataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142274 False 548 lncRNA 0.41 2 22636042 22636625
TU142276 True 778 lncRNA 0.41 4 22636042 22660713

Neighbor

gene id symbol gene type direction distance location
rps19 LOC100689943 coding downstream 104986 22525184 ~ 22531056 (-)
bcam LOC106577531 coding downstream 136896 22399657 ~ 22499146 (-)
LOC110537898 LOC106605692 coding downstream 319974 22314451 ~ 22316068 (-)
LOC110537882 LOC106577487 coding downstream 382556 22236828 ~ 22253486 (-)
LOC110537877 LOC106577478 coding downstream 401118 22229800 ~ 22234924 (-)
LOC110534479 LOC106578237 coding upstream 94639 22755352 ~ 22774315 (-)
si:ch211-79k12.2 LOC106605590 coding upstream 113795 22774508 ~ 22779710 (-)
LOC118938460 LOC106605577 coding upstream 119331 22780044 ~ 22791836 (-)
LOC110538019 zn576 coding upstream 133473 22794186 ~ 22803401 (-)
LOC110538006 LOC106605591 coding upstream 142734 22803447 ~ 22813135 (-)
G123149 NA non-coding downstream 11773 22610750 ~ 22624269 (-)
G123150 NA non-coding downstream 19170 22612026 ~ 22616872 (-)
cadm4 LOC106577561 non-coding downstream 42911 22550928 ~ 22749138 (-)
G123090 NA non-coding downstream 60720 22481870 ~ 22575322 (-)
G123088 NA non-coding downstream 161838 22473454 ~ 22474204 (-)
G123247 NA non-coding upstream 105540 22766253 ~ 22767773 (-)
G123267 NA non-coding upstream 156550 22817263 ~ 22817587 (-)
G123268 NA non-coding upstream 157353 22818066 ~ 22818280 (-)
G123241 NA non-coding upstream 159887 22820600 ~ 22821816 (-)
G122972 NA other downstream 257882 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 478508 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 608325 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 780141 21851433 ~ 21856413 (-)
G122733 LOC106592382 other downstream 823610 21796507 ~ 21812432 (-)
G123308 NA other upstream 344273 23004986 ~ 23005812 (-)
G123435 NA other upstream 524927 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 619466 23279116 ~ 23281851 (-)
G124840 NA other upstream 1243126 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 1498454 24144519 ~ 24172836 (-)

Expression


Co-expression Network