G123247


Basic Information

Item Value
gene id G123247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22766253 ~ 22767773 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU142377
aatgccctatatgtggcctaatgttaggtgcaccagcccagtctaatgccctatatgtggcctaatgttagtttcaccagcccagtctaatgccctatatgtggcctaatgttaggggcaccagcccagtctaatgccctatatgtggcctaatgttagtttcaccagcccagtctaatgccctatatgtggcctaatgttaggtgcaccagcccagtctaatgccctatatgtggcctaatgttaagggcaccagcccagtctaatgccctatatgtggcctaatgttaggggcaccagcccagtctaatgccctatatgtggcctaatgttagtttcaccagcccagtctaatgccctatatgtggcctaatgttaggggcaccagcccagtctaatgccctatatgtggcctaatgttagtttcaccagcccagtctaatgccctatatatggcctaatgttagtttcaccagcccagtctaatgccctatatgtggcctaatgttaggtgcaccagcccagtctaatgccctatatgtggcctaatgttaggggcaccagcccagtctaatgccctatatgtggcctaatgttaggggcaccagcccagtctaatgccctatatgtggcctaatgttaggggcaccagcccagtctaatgccctatatgtggcctaatgttagtttcaccagcccagtctaatgccctatatgtggcctaatgttagttgcaccagcccagtctaatgccctatatgtggcctaatgttaggggcaccagcccagtctaatgccctatatgtggcctaattGTTAGGtgcaccagcccagtctaatgccctatatgtggcctaatgttaggtgCACCAGCCCATCCACTGAAGTGTATCAAAATACTTCTCAACAAAGAAACCCCACTGGAATGACTCTAGAAATAGGTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142377 True 946 lncRNA 0.36 3 22766253 22767773

Neighbor

gene id symbol gene type direction distance location
cadm4 LOC106577561 coding downstream 17115 22550928 ~ 22749138 (-)
rps19 LOC100689943 coding downstream 235197 22525184 ~ 22531056 (-)
bcam LOC106577531 coding downstream 267107 22399657 ~ 22499146 (-)
LOC110537898 LOC106605692 coding downstream 450185 22314451 ~ 22316068 (-)
LOC110537882 LOC106577487 coding downstream 512767 22236828 ~ 22253486 (-)
si:ch211-79k12.2 LOC106605590 coding upstream 6735 22774508 ~ 22779710 (-)
LOC118938460 LOC106605577 coding upstream 12271 22780044 ~ 22791836 (-)
LOC110538019 zn576 coding upstream 26413 22794186 ~ 22803401 (-)
LOC110538006 LOC106605591 coding upstream 35674 22803447 ~ 22813135 (-)
LOC110538050 LOC106605593 coding upstream 55164 22822697 ~ 22838508 (-)
G123158 NA non-coding downstream 105540 22636042 ~ 22660713 (-)
G123149 NA non-coding downstream 141984 22610750 ~ 22624269 (-)
G123150 NA non-coding downstream 149381 22612026 ~ 22616872 (-)
G123090 NA non-coding downstream 190931 22481870 ~ 22575322 (-)
G123267 NA non-coding upstream 49490 22817263 ~ 22817587 (-)
G123268 NA non-coding upstream 50293 22818066 ~ 22818280 (-)
G123241 NA non-coding upstream 52827 22820600 ~ 22821816 (-)
G122972 NA other downstream 388093 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 608719 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 738536 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 910352 21851433 ~ 21856413 (-)
G122733 LOC106592382 other downstream 953821 21796507 ~ 21812432 (-)
G123308 NA other upstream 237213 23004986 ~ 23005812 (-)
G123435 NA other upstream 417867 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 512406 23279116 ~ 23281851 (-)
G124840 NA other upstream 1136066 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 1391394 24144519 ~ 24172836 (-)

Expression


Co-expression Network