G122478


Basic Information

Item Value
gene id G122478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22859461 ~ 22859700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU141464
aggaagtcttggtggttccaaacatcttccttttaagaatgatggaggccactgtgttcttggggaccttcaatgctgcagacatattttgatacccttccccatgtctgtgcctcgacacaaacctgtctcaattccttcgacctcatgtcttggtttttactctgacatgcactgtcaactgtgggacattataaagacaggtgtgtgcctttcaaaatcatatccaatcaactgaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141464 True 240 lncRNA 0.43 1 22859461 22859700

Neighbor

gene id symbol gene type direction distance location
LOC110538314 trp-iii coding upstream 1389 22856570 ~ 22858072 (+)
LOC110538298 LOC106605596 coding upstream 2783 22854739 ~ 22856678 (+)
LOC110537974 LOC106605680 coding upstream 315057 22496121 ~ 22544404 (+)
LOC118944072 NA coding upstream 467282 22390731 ~ 22392179 (+)
LOC110537956 LOC106605684 coding upstream 474704 22381333 ~ 22384757 (+)
LOC110538188 LOC106578351 coding downstream 134051 22993751 ~ 22997374 (+)
LOC110538306 LOC106605606 coding downstream 196081 23055781 ~ 23069547 (+)
kcnn4 LOC106578046 coding downstream 217646 23077346 ~ 23119231 (+)
LOC110538208 smg9 coding downstream 268536 23128236 ~ 23135855 (+)
LOC110538332 LOC106605607 coding downstream 288805 23148505 ~ 23151891 (+)
G122473 NA non-coding upstream 29989 22829263 ~ 22829472 (+)
G122469 NA non-coding upstream 35611 22823394 ~ 22823850 (+)
G122468 NA non-coding upstream 36184 22820526 ~ 22823277 (+)
G122467 NA non-coding upstream 39737 22819504 ~ 22819724 (+)
G122464 NA non-coding upstream 41464 22817785 ~ 22817997 (+)
G122482 NA non-coding downstream 15909 22875609 ~ 22875839 (+)
G122483 NA non-coding downstream 16537 22876237 ~ 22876696 (+)
G122484 NA non-coding downstream 17283 22876983 ~ 22877222 (+)
G122486 NA non-coding downstream 23564 22883264 ~ 22883490 (+)
G122487 LOC106605599 non-coding downstream 24307 22884007 ~ 22889022 (+)
G122459 LOC106578191 other upstream 48198 22810767 ~ 22811263 (+)
apoc4 NA other upstream 509525 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 512846 22342491 ~ 22346615 (+)
G122030 NA other upstream 840646 22015130 ~ 22018815 (+)
LOC110537735 LOC106595974 other upstream 1034367 21821165 ~ 21825285 (+)
G123980 NA other downstream 964993 23824693 ~ 23825502 (+)
LOC110538497 LOC106605627 other downstream 1002217 23861576 ~ 23881639 (+)
G124121 LOC106605585 other downstream 1287161 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 1681304 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 2013351 24873051 ~ 24873834 (+)

Expression


Co-expression Network