G122482


Basic Information

Item Value
gene id G122482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22875609 ~ 22875839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU141477
acccaaactgttaccgacctatatacactgctcaaaaaaataaagggaacacgtaaacaacacaatgtaactccaaatcaaactgtccacttaggaagcaacactgattgacaataaatttcacatgctgttgtgcaaatggaataaacaacaggtggcaattagcaagacacccccaataaaggagtggttctgcaggtggcaaccacagaccacttctcagttcctatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141477 True 231 lncRNA 0.41 1 22875609 22875839

Neighbor

gene id symbol gene type direction distance location
LOC110538314 trp-iii coding upstream 17537 22856570 ~ 22858072 (+)
LOC110538298 LOC106605596 coding upstream 18931 22854739 ~ 22856678 (+)
LOC110537974 LOC106605680 coding upstream 331205 22496121 ~ 22544404 (+)
LOC118944072 NA coding upstream 483430 22390731 ~ 22392179 (+)
LOC110537956 LOC106605684 coding upstream 490852 22381333 ~ 22384757 (+)
LOC110538188 LOC106578351 coding downstream 117912 22993751 ~ 22997374 (+)
LOC110538306 LOC106605606 coding downstream 179942 23055781 ~ 23069547 (+)
kcnn4 LOC106578046 coding downstream 201507 23077346 ~ 23119231 (+)
LOC110538208 smg9 coding downstream 252397 23128236 ~ 23135855 (+)
LOC110538332 LOC106605607 coding downstream 272666 23148505 ~ 23151891 (+)
G122478 NA non-coding upstream 15909 22859461 ~ 22859700 (+)
G122473 NA non-coding upstream 46137 22829263 ~ 22829472 (+)
G122469 NA non-coding upstream 51759 22823394 ~ 22823850 (+)
G122468 NA non-coding upstream 52332 22820526 ~ 22823277 (+)
G122467 NA non-coding upstream 55885 22819504 ~ 22819724 (+)
G122483 NA non-coding downstream 398 22876237 ~ 22876696 (+)
G122484 NA non-coding downstream 1144 22876983 ~ 22877222 (+)
G122486 NA non-coding downstream 7425 22883264 ~ 22883490 (+)
G122487 LOC106605599 non-coding downstream 8168 22884007 ~ 22889022 (+)
G122488 NA non-coding downstream 13803 22889642 ~ 22889893 (+)
G122459 LOC106578191 other upstream 64346 22810767 ~ 22811263 (+)
apoc4 NA other upstream 525673 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 528994 22342491 ~ 22346615 (+)
G122030 NA other upstream 856794 22015130 ~ 22018815 (+)
LOC110537735 LOC106595974 other upstream 1050515 21821165 ~ 21825285 (+)
G123980 NA other downstream 948854 23824693 ~ 23825502 (+)
LOC110538497 LOC106605627 other downstream 986078 23861576 ~ 23881639 (+)
G124121 LOC106605585 other downstream 1271022 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 1665165 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 1997212 24873051 ~ 24873834 (+)

Expression


Co-expression Network