G123281


Basic Information

Item Value
gene id G123281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22876235 ~ 22877073 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU142413
cttttttctttacatagttgaatgtgctgacaacaaaatcacacatcaatggaaatcaaatttatcaacccatggaggtctggatttggagtgacactcaaaattaaagtggaaaaccacactacaggctgatccaactttgatgtaatgtccttaaaacaagtcaaaatgaggctcagtagcgtgtgtggcctccacgtgcctgtatgacctccctacaacgcctgggcatgctcccgatgaggtggcggatggtctcctgagggatctcctcccagacctggactaaagcatcagGGAAACTCCTGGGCAGTCTGTGGtgcatggagcgagacatgatgtgctcaattggattcaggtctggggaacgggtgggccagtccatagcatcaatgccttcctcttgcaggaactgctgacacactccagtcacatgaggtctagcattgtcttgcattaggaggaacccagggccaaccgcaccagcatatggtctcacaaggggtctgaggatctcatctcggtacctaatggcagtcaggctacctctggcgagcacattgagggctgtgcggccccccaaagaaatgccaccccacaccatgactgacccaccgccaaaccggtcatgctggaggatgttgcaggcagcagaacgttctccaccgcatctccagactgtcacgtctgtcacgtgctcagtgtgaacctgctttcatctgtgaagagcacagggcgccagtggcgaatttgccaatcttggtgttctctggcaaatgccaaacgtcctgcacggtgttgggctgtaagcacaacccccacctgtggacgtcgggccc

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142413 True 839 lncRNA 0.36 1 22876235 22877073

Neighbor

gene id symbol gene type direction distance location
LOC110534486 NA coding downstream 22389 22853130 ~ 22853846 (-)
LOC118936533 LOC106605595 coding downstream 25385 22847803 ~ 22850850 (-)
LOC118938551 LOC106605594 coding downstream 30754 22839988 ~ 22845481 (-)
LOC110538050 LOC106605593 coding downstream 37727 22822697 ~ 22838508 (-)
LOC110538006 LOC106605591 coding downstream 63100 22803447 ~ 22813135 (-)
im:7147486 LOC106605599 coding upstream 6905 22883978 ~ 22899520 (-)
LOC110538037 LOC106605599 coding upstream 30013 22907086 ~ 22949770 (-)
si:dkeyp-84f3.5 LOC106605600 coding upstream 76508 22953581 ~ 22965449 (-)
LOC110538268 LOC106605601 coding upstream 90978 22968051 ~ 22971540 (-)
LOC110538089 LOC106605603 coding upstream 242309 23119382 ~ 23129010 (-)
G123277 LOC106605579 non-coding downstream 12981 22860225 ~ 22863254 (-)
G123242 NA non-coding downstream 21104 22854889 ~ 22855131 (-)
G123240 NA non-coding downstream 29772 22845750 ~ 22846463 (-)
G123234 NA non-coding downstream 36699 22838771 ~ 22839536 (-)
G123283 NA non-coding upstream 12659 22889732 ~ 22889979 (-)
G123296 NA non-coding upstream 41255 22918328 ~ 22918547 (-)
G123299 NA non-coding upstream 46121 22923194 ~ 22923601 (-)
G123300 NA non-coding upstream 46753 22923826 ~ 22924025 (-)
G123310 NA non-coding upstream 53863 22930936 ~ 22931634 (-)
G122972 NA other downstream 498075 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 718701 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 848518 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 1020334 21851433 ~ 21856413 (-)
G122733 LOC106592382 other downstream 1063803 21796507 ~ 21812432 (-)
G123308 NA other upstream 127913 23004986 ~ 23005812 (-)
G123435 NA other upstream 308567 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 403106 23279116 ~ 23281851 (-)
G124840 NA other upstream 1026766 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 1282094 24144519 ~ 24172836 (-)

Expression


Co-expression Network