Gene
RNA
| Item | Value |
|---|---|
| gene id | G122508 |
| gene name | LOC106581475 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22922126 ~ 22922409 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU141519 | True | 284 | lncRNA | 0.39 | 1 | 22922126 | 22922409 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538314 | trp-iii | coding | upstream | 64054 | 22856570 ~ 22858072 (+) |
| LOC110538298 | LOC106605596 | coding | upstream | 65448 | 22854739 ~ 22856678 (+) |
| LOC110537974 | LOC106605680 | coding | upstream | 377722 | 22496121 ~ 22544404 (+) |
| LOC118944072 | NA | coding | upstream | 529947 | 22390731 ~ 22392179 (+) |
| LOC110537956 | LOC106605684 | coding | upstream | 537369 | 22381333 ~ 22384757 (+) |
| LOC110538188 | LOC106578351 | coding | downstream | 71342 | 22993751 ~ 22997374 (+) |
| LOC110538306 | LOC106605606 | coding | downstream | 133372 | 23055781 ~ 23069547 (+) |
| kcnn4 | LOC106578046 | coding | downstream | 154937 | 23077346 ~ 23119231 (+) |
| LOC110538208 | smg9 | coding | downstream | 205827 | 23128236 ~ 23135855 (+) |
| LOC110538332 | LOC106605607 | coding | downstream | 226096 | 23148505 ~ 23151891 (+) |
| G122504 | NA | non-coding | upstream | 3070 | 22918837 ~ 22919056 (+) |
| G122488 | NA | non-coding | upstream | 32233 | 22889642 ~ 22889893 (+) |
| G122487 | LOC106605599 | non-coding | upstream | 33104 | 22884007 ~ 22889022 (+) |
| G122486 | NA | non-coding | upstream | 38636 | 22883264 ~ 22883490 (+) |
| G122484 | NA | non-coding | upstream | 44904 | 22876983 ~ 22877222 (+) |
| G122509 | NA | non-coding | downstream | 1725 | 22924134 ~ 22924426 (+) |
| G122515 | NA | non-coding | downstream | 7934 | 22930343 ~ 22930663 (+) |
| G122560 | NA | non-coding | downstream | 59936 | 22982345 ~ 22982569 (+) |
| G122571 | NA | non-coding | downstream | 76362 | 22998771 ~ 22999137 (+) |
| G122572 | NA | non-coding | downstream | 78783 | 23001192 ~ 23001689 (+) |
| G122459 | LOC106578191 | other | upstream | 110863 | 22810767 ~ 22811263 (+) |
| apoc4 | NA | other | upstream | 572190 | 22348543 ~ 22349936 (+) |
| LOC110537939 | apoc1 | other | upstream | 575511 | 22342491 ~ 22346615 (+) |
| G122030 | NA | other | upstream | 903311 | 22015130 ~ 22018815 (+) |
| LOC110537735 | LOC106595974 | other | upstream | 1097032 | 21821165 ~ 21825285 (+) |
| G123980 | NA | other | downstream | 902284 | 23824693 ~ 23825502 (+) |
| LOC110538497 | LOC106605627 | other | downstream | 939508 | 23861576 ~ 23881639 (+) |
| G124121 | LOC106605585 | other | downstream | 1224452 | 24146861 ~ 24148593 (+) |
| LOC110538915 | LOC106605649 | other | downstream | 1618595 | 24540963 ~ 24544247 (+) |
| G124451 | LOC106578403 | other | downstream | 1950642 | 24873051 ~ 24873834 (+) |
