G123299



Basic Information


Item Value
gene id G123299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22923194 ~ 22923601 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU142431
gtcctgaggcatggtcctagggctcaggtcctccgagagagagaaagaattagagagcatacttaaattctcacaggacaccggataagacctGAGAAAtaatccagatataacagactgaccctagccccccgacacaaactactgcagcataaatactggaggctgagacaggaggggtcgggagacactggccCCGTTCGACgattcccccggacagggccaaacaggcaggatataaccccaccaactttgccaaagcacagcccccacaccactagggtgatatcttcaaccaccaactaaccatcctgagacaaggccgagtatagcccacaaagatctccgcaacggcacaacccaaggggggcgccaacccagacaggaagatcacttgagtgactcaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU142431 True 408 lncRNA 0.46 1 22923194 22923601

Neighbor


gene id symbol gene type direction distance location
im:7147486 LOC106605599 coding downstream 23674 22883978 ~ 22899520 (-)
LOC110538076 LOC106578103 coding downstream 40258 22864942 ~ 22882936 (-)
LOC110534486 NA coding downstream 69348 22853130 ~ 22853846 (-)
LOC118936533 LOC106605595 coding downstream 72344 22847803 ~ 22850850 (-)
LOC118938551 LOC106605594 coding downstream 77713 22839988 ~ 22845481 (-)
si:dkeyp-84f3.5 LOC106605600 coding upstream 29980 22953581 ~ 22965449 (-)
LOC110538268 LOC106605601 coding upstream 44450 22968051 ~ 22971540 (-)
LOC110538089 LOC106605603 coding upstream 195781 23119382 ~ 23129010 (-)
LOC110538224 LOC106605608 coding upstream 252859 23176460 ~ 23200956 (-)
LOC110538290 LOC106605611 coding upstream 300888 23224489 ~ 23233768 (-)
G123296 NA non-coding downstream 4647 22918328 ~ 22918547 (-)
G123283 NA non-coding downstream 33215 22889732 ~ 22889979 (-)
G123281 NA non-coding downstream 46121 22876235 ~ 22877073 (-)
G123277 LOC106605579 non-coding downstream 59940 22860225 ~ 22863254 (-)
G123242 NA non-coding downstream 68063 22854889 ~ 22855131 (-)
G123300 NA non-coding upstream 225 22923826 ~ 22924025 (-)
G123310 NA non-coding upstream 7335 22930936 ~ 22931634 (-)
G123311 NA non-coding upstream 8155 22931756 ~ 22990628 (-)
G123337 NA non-coding upstream 58741 22982342 ~ 22982609 (-)
G123346 NA non-coding upstream 69461 22993062 ~ 22993274 (-)
G122972 NA other downstream 545034 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 765660 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 895477 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 1067293 21851433 ~ 21856413 (-)
G122733 LOC106592382 other downstream 1110762 21796507 ~ 21812432 (-)
G123308 NA other upstream 81385 23004986 ~ 23005812 (-)
G123435 NA other upstream 262039 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 356578 23279116 ~ 23281851 (-)
G124840 NA other upstream 980238 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 1235566 24144519 ~ 24172836 (-)

Expression


G123299 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
End of interactive chart.

G123299 Expression in each Bioproject

Bar chart with 19 bars.
G123299 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network