XLOC_002102



Basic Information


Item Value
gene id XLOC_002102
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22373301 ~ 22377028 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005707
GCAACGTGTAAAAATATTTAGCTAAAATGTTACAACATGCACACATTTTTCATATACCTGCATCGGTTTTGTCTTTTAAATGCAGGAACATTTGATAGCAGGCTCTGCGTGTTAAACACATGTGGTTATGAGAGTATTTCCGTCATACAGTACGTCTGGTGTTGTGTCAAACCACATCTTCATCTCCTGCCATCTTTTCCTTACTCAGCTTCTCCAGCAGTTGGTGGTTTTCTCCTCCAGGTGTTTTGTGTCCAGGTTTGGTGCCGCTGGGTTGATTAGCTGTGCTCTGGTTGCCATGGTGATGCCGAGTGCCTGAAGAACAGCATACGCCGGATGATTCCGTCTTCACTTTTGACTCTTGATTTCTTTGTAGACACTTGCATCTCCTGTGAGGATTCGGCCCAGATGTTTCACTAACGTGGTTTCTGTTTTGCCTGTGCAAGCATACGTGTTGTTCCTCAGCTGTTCAGATTGGCTTGTGTGTTCTTTGCGGCTATGCACACATTTACTTTAGAATACATTTACTTCTCTATAAAGTCCCGGGGCTTTGATCAGCAGAACGGTGCCGTTTGCTCAGGGCCTGTGAGGAGACGTTTACGT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005707 True 600 lncRNA 0.45 2 22373301 22377028

Neighbor


gene id symbol gene type direction distance location
XLOC_002101 NA coding upstream 93853 22275913 ~ 22279448 (+)
XLOC_002100 NA coding upstream 99439 22253344 ~ 22273862 (+)
XLOC_002099 NA coding upstream 110036 22224203 ~ 22263265 (+)
XLOC_002098 NA coding upstream 233961 22134533 ~ 22139340 (+)
XLOC_002097 npm1a coding upstream 328182 22034477 ~ 22045119 (+)
XLOC_002103 nlgn2b coding downstream 4774 22381802 ~ 22478129 (+)
XLOC_002104 gigyf1b coding downstream 133252 22510280 ~ 22533793 (+)
XLOC_002105 efnb3a coding downstream 159665 22536693 ~ 22606468 (+)
XLOC_002106 NA coding downstream 243302 22620330 ~ 22621291 (+)
XLOC_002107 kdm6bb coding downstream 347031 22724059 ~ 22760659 (+)
XLOC_002095 BX005027.1 non-coding upstream 392636 21980547 ~ 21980665 (+)
XLOC_002110 NA non-coding downstream 457283 22834311 ~ 22838481 (+)
XLOC_002111 AL807389.1 non-coding downstream 470244 22847272 ~ 22847404 (+)
XLOC_002116 FP102052.2 non-coding downstream 561203 22938231 ~ 22956370 (+)
XLOC_002117 NA non-coding downstream 583261 22960289 ~ 22965426 (+)

Expression



Co-expression Network