G123307


Basic Information

Item Value
gene id G123307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 23005839 ~ 23006807 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU142446
GGCATCACAACACGATGCATCGCAGACCTCATCTATTGGTTTCTCTGCATCTCGTGCGATTATGACGCCATTGTGGTGATAATGACGATAATGAGAATCACGATCATATGGATTGCATTTACATAGCACTTCTCACAAGGCCGCAAAGCACTTCACTGTGCGTTGTCATCCTGTCCAAAGTGAGTTGAGAACATCAGCTCCATTGATATCAAAGTGGGTGACTGTTGATATGGAATGACTTTGAAACATTGATGTGGAGGTGGGAAGGAGATAGATCCGACCCTCAAActtgcaatacacacacacaaacacacacacacagaccacatctttcagtttagtcacattaCTGTGCTTCCCCTTTTAATGGGAGCAGCATGTCTCTGGTTGGGCTGAGAGCATTCCTCCCTGACGCAGGGAAGGAGGCCTAGACAGGGTGGGGGAGGAAGGGATAATTTGAACCAGCTGCCAGGGGAAGTGATCTCCTGCTTCGTCACACAGAGACCTCCTCAGACCCTGTCTGACCAACTAACAGCCTGGGAACCCTAGCCTGGGTCCCAACATAAACCCAGCCCCTCGTATCAGCATCCTCCATCCACATCTCTGCGTCTGGGCTTTCAGATGGTCAGGGTGTTTGGGGATAGTCAcgtcacatacagtggggcaaaaaagtaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtcattttcatcataggtacacttcaactatgacagacaaatgagagaaaaaaatccagaaaatcacattgtaggattttttatgaatttatttgcaaattatggtggaaaacttttgttattgaccaaatacttatttatctcaatactttgttatataccctttgttggcaatgacagaggtcaaacattttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU142446 True 969 lncRNA 0.45 1 23005839 23006807

Neighbor

gene id symbol gene type direction distance location
LOC110538268 LOC106605601 coding downstream 34299 22968051 ~ 22971540 (-)
si:dkeyp-84f3.5 LOC106605600 coding downstream 40390 22953581 ~ 22965449 (-)
LOC110538037 LOC106605599 coding downstream 56069 22907086 ~ 22949770 (-)
im:7147486 LOC106605599 coding downstream 106319 22883978 ~ 22899520 (-)
LOC110538076 LOC106578103 coding downstream 122903 22864942 ~ 22882936 (-)
LOC110538089 LOC106605603 coding upstream 112575 23119382 ~ 23129010 (-)
LOC110538224 LOC106605608 coding upstream 169653 23176460 ~ 23200956 (-)
LOC110538290 LOC106605611 coding upstream 217682 23224489 ~ 23233768 (-)
LOC110538325 lin37 coding upstream 255656 23262463 ~ 23267059 (-)
hspb6 hspb6l coding upstream 269231 23276038 ~ 23278785 (-)
G123306 LOC100194703 non-coding downstream 1927 23002206 ~ 23003912 (-)
G123348 has1 non-coding downstream 10614 22994979 ~ 22995225 (-)
G123346 NA non-coding downstream 12565 22993062 ~ 22993274 (-)
G123311 NA non-coding downstream 15211 22931756 ~ 22990628 (-)
G123337 NA non-coding downstream 23230 22982342 ~ 22982609 (-)
G123304 NA non-coding upstream 3829 23010636 ~ 23040313 (-)
G123305 NA non-coding upstream 10113 23016920 ~ 23018214 (-)
G123363 NA non-coding upstream 43558 23050365 ~ 23050929 (-)
G123365 NA non-coding upstream 46635 23053442 ~ 23053662 (-)
G123367 NA non-coding upstream 48048 23054855 ~ 23055073 (-)
G123308 NA other downstream 27 23004986 ~ 23005812 (-)
G122972 NA other downstream 627679 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 848305 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 978122 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 1149938 21851433 ~ 21856413 (-)
G123435 NA other upstream 178833 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 273372 23279116 ~ 23281851 (-)
G124840 NA other upstream 897032 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 1152360 24144519 ~ 24172836 (-)
G125003 NA other upstream 1262419 24269226 ~ 24270136 (-)

Expression


Co-expression Network