G123389


Basic Information

Item Value
gene id G123389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 23093813 ~ 23094363 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU142540
gccttaacaggggtggtattcagaagatagccctatttggtaaaagaccaagaacagctcaaataagcaaagagaaacgacagtccatcattactttaagacatgaaggtcagtcaatgcggaacattttaagaactttgaaagtttcttcaagtgcagtggcaaaaaccatcaagcactatgatgaaactggctctcatgaggaccgataagccatcccatctgcttAGTAgtactatcatttatttttcaacaggacaacaatgacccaaaacacacatccaggctgtgtaagggctatttgaccaagaaggagagtgatggagtgcttcatcatatgacctggcctccacaatcacccgacctcaacccaattgagatggtttgggaagagttggacTGCAGATTTAAGGAAAAgccgccaacaagtgctcagcatatgtgggaactccttcaagactgttggaaaagcaatccagctgaagctggttgagagaatgccaaacgtGTGCAAacttgtcatcaaggcaaagggtagctactttgaagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142540 True 551 lncRNA 0.43 1 23093813 23094363

Neighbor

gene id symbol gene type direction distance location
LOC110538268 LOC106605601 coding downstream 122273 22968051 ~ 22971540 (-)
si:dkeyp-84f3.5 LOC106605600 coding downstream 128364 22953581 ~ 22965449 (-)
LOC110538037 LOC106605599 coding downstream 144043 22907086 ~ 22949770 (-)
im:7147486 LOC106605599 coding downstream 194293 22883978 ~ 22899520 (-)
LOC110538076 LOC106578103 coding downstream 210877 22864942 ~ 22882936 (-)
LOC110538089 LOC106605603 coding upstream 25019 23119382 ~ 23129010 (-)
LOC110538224 LOC106605608 coding upstream 82097 23176460 ~ 23200956 (-)
LOC110538290 LOC106605611 coding upstream 130126 23224489 ~ 23233768 (-)
LOC110538325 lin37 coding upstream 168100 23262463 ~ 23267059 (-)
hspb6 hspb6l coding upstream 181675 23276038 ~ 23278785 (-)
G123367 NA non-coding downstream 38740 23054855 ~ 23055073 (-)
G123365 NA non-coding downstream 40151 23053442 ~ 23053662 (-)
G123363 NA non-coding downstream 42884 23050365 ~ 23050929 (-)
G123304 NA non-coding downstream 53500 23010636 ~ 23040313 (-)
G123305 NA non-coding downstream 75599 23016920 ~ 23018214 (-)
G123399 NA non-coding upstream 19522 23113885 ~ 23114131 (-)
G123429 NA non-coding upstream 76435 23170798 ~ 23171042 (-)
G123647 LOC106605609 non-coding upstream 141991 23236354 ~ 23236889 (-)
G123308 NA other downstream 88001 23004986 ~ 23005812 (-)
G122972 NA other downstream 715653 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 936279 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 1066096 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 1237912 21851433 ~ 21856413 (-)
G123435 NA other upstream 91277 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 185816 23279116 ~ 23281851 (-)
G124840 NA other upstream 809476 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 1064804 24144519 ~ 24172836 (-)
G125003 NA other upstream 1174863 24269226 ~ 24270136 (-)

Expression


Co-expression Network