G122617


Basic Information

Item Value
gene id G122617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 23097430 ~ 23097959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU141645
ataaaatataatttgattggtttaacacttttttggttactacatgattccatatgtgttatttcacagtttggatgtcttcactattattctacaatgcagaaaatagtacaaataaagaaaccctggaatgagtaggtgtgtccaaacttttgactggtactgtatataggtaTGGAATGGGCGACTTTTATATCTCTCAGTCCTGGCATGTGGAATAGAGAGAAGGTGGATCTGTCTGACACTTGTCCTCGGCAGGCAGGTATCAAGTCTCTGAAGGGGGACTTGAACAGGGAGAAAGCAAAGTCCAGGCACAGTTTCACTCTTCTCTCATGAAGTGAGGGCAGTGATAGTGACAGAGCATTGTTGTTTCCAGGATATGCCGTGCCAGGGATGGTTCTGCAAACACACTTCTGTATGGGCTTGAGTTGCTCAGAGAGGGCTTGAGTCAAGAAGCTGTCCCAAGCTGTTGCGGTATACTCTAGGCAGGGTTGAACGTAGATGGCGACCAGGTCCATTTGTGGAAAGTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141645 True 530 lncRNA 0.43 1 23097430 23097959

Neighbor

gene id symbol gene type direction distance location
LOC110538306 LOC106605606 coding upstream 27883 23055781 ~ 23069547 (+)
LOC110538188 LOC106578351 coding upstream 100056 22993751 ~ 22997374 (+)
LOC110538314 trp-iii coding upstream 239358 22856570 ~ 22858072 (+)
LOC110538298 LOC106605596 coding upstream 240752 22854739 ~ 22856678 (+)
LOC110537974 LOC106605680 coding upstream 553026 22496121 ~ 22544404 (+)
LOC110538208 smg9 coding downstream 30277 23128236 ~ 23135855 (+)
LOC110538332 LOC106605607 coding downstream 50546 23148505 ~ 23151891 (+)
si:dkey-238d18.4 LOC106605609 coding downstream 138261 23236220 ~ 23245933 (+)
hsc70 hsp70-3 coding downstream 148593 23246552 ~ 23251865 (+)
LOC110538364 ctrl coding downstream 154875 23252834 ~ 23255257 (+)
G122593 NA non-coding upstream 46336 23050783 ~ 23051094 (+)
G122575 NA non-coding upstream 85057 23010422 ~ 23012373 (+)
G122573 LOC100194703 non-coding upstream 91803 23001935 ~ 23005627 (+)
G122572 NA non-coding upstream 95741 23001192 ~ 23001689 (+)
G122571 NA non-coding upstream 98293 22998771 ~ 22999137 (+)
G122630 NA non-coding downstream 18806 23116765 ~ 23117208 (+)
kcnn4 LOC106578046 non-coding downstream 20226 23077346 ~ 23119231 (+)
G122632 NA non-coding downstream 29723 23127682 ~ 23127926 (+)
G122637 NA non-coding downstream 42093 23140052 ~ 23140544 (+)
G122667 NA non-coding downstream 87732 23185691 ~ 23199253 (+)
G122459 LOC106578191 other upstream 286167 22810767 ~ 22811263 (+)
apoc4 NA other upstream 747494 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 750815 22342491 ~ 22346615 (+)
G122030 NA other upstream 1078615 22015130 ~ 22018815 (+)
LOC110537735 LOC106595974 other upstream 1272336 21821165 ~ 21825285 (+)
G123980 NA other downstream 726734 23824693 ~ 23825502 (+)
LOC110538497 LOC106605627 other downstream 763958 23861576 ~ 23881639 (+)
G124121 LOC106605585 other downstream 1048902 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 1443045 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 1775092 24873051 ~ 24873834 (+)

Expression


Co-expression Network