Gene
RNA
| Item | Value |
|---|---|
| gene id | G122630 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 23116765 ~ 23117208 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU141659 | True | 444 | lncRNA | 0.40 | 1 | 23116765 | 23117208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538306 | LOC106605606 | coding | upstream | 47218 | 23055781 ~ 23069547 (+) |
| LOC110538188 | LOC106578351 | coding | upstream | 119391 | 22993751 ~ 22997374 (+) |
| LOC110538314 | trp-iii | coding | upstream | 258693 | 22856570 ~ 22858072 (+) |
| LOC110538298 | LOC106605596 | coding | upstream | 260087 | 22854739 ~ 22856678 (+) |
| LOC110537974 | LOC106605680 | coding | upstream | 572361 | 22496121 ~ 22544404 (+) |
| LOC110538208 | smg9 | coding | downstream | 11028 | 23128236 ~ 23135855 (+) |
| LOC110538332 | LOC106605607 | coding | downstream | 31297 | 23148505 ~ 23151891 (+) |
| si:dkey-238d18.4 | LOC106605609 | coding | downstream | 119012 | 23236220 ~ 23245933 (+) |
| hsc70 | hsp70-3 | coding | downstream | 129344 | 23246552 ~ 23251865 (+) |
| LOC110538364 | ctrl | coding | downstream | 135626 | 23252834 ~ 23255257 (+) |
| G122617 | NA | non-coding | upstream | 18806 | 23097430 ~ 23097959 (+) |
| G122593 | NA | non-coding | upstream | 65671 | 23050783 ~ 23051094 (+) |
| G122575 | NA | non-coding | upstream | 104392 | 23010422 ~ 23012373 (+) |
| G122573 | LOC100194703 | non-coding | upstream | 111138 | 23001935 ~ 23005627 (+) |
| G122572 | NA | non-coding | upstream | 115076 | 23001192 ~ 23001689 (+) |
| kcnn4 | LOC106578046 | non-coding | downstream | 977 | 23077346 ~ 23119231 (+) |
| G122632 | NA | non-coding | downstream | 10474 | 23127682 ~ 23127926 (+) |
| G122637 | NA | non-coding | downstream | 22844 | 23140052 ~ 23140544 (+) |
| G122667 | NA | non-coding | downstream | 68483 | 23185691 ~ 23199253 (+) |
| G123471 | NA | non-coding | downstream | 141611 | 23258819 ~ 23259033 (+) |
| G122459 | LOC106578191 | other | upstream | 305502 | 22810767 ~ 22811263 (+) |
| apoc4 | NA | other | upstream | 766829 | 22348543 ~ 22349936 (+) |
| LOC110537939 | apoc1 | other | upstream | 770150 | 22342491 ~ 22346615 (+) |
| G122030 | NA | other | upstream | 1097950 | 22015130 ~ 22018815 (+) |
| LOC110537735 | LOC106595974 | other | upstream | 1291671 | 21821165 ~ 21825285 (+) |
| G123980 | NA | other | downstream | 707485 | 23824693 ~ 23825502 (+) |
| LOC110538497 | LOC106605627 | other | downstream | 744709 | 23861576 ~ 23881639 (+) |
| G124121 | LOC106605585 | other | downstream | 1029653 | 24146861 ~ 24148593 (+) |
| LOC110538915 | LOC106605649 | other | downstream | 1423796 | 24540963 ~ 24544247 (+) |
| G124451 | LOC106578403 | other | downstream | 1755843 | 24873051 ~ 24873834 (+) |
