G122637


Basic Information

Item Value
gene id G122637
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 23140052 ~ 23140544 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU141666
atccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtctgttaaaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcaataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcattctggatgaactgcagagatctacagctgagttgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtgagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141666 True 493 lncRNA 0.47 1 23140052 23140544

Neighbor

gene id symbol gene type direction distance location
LOC110538208 smg9 coding upstream 4197 23128236 ~ 23135855 (+)
kcnn4 LOC106578046 coding upstream 20821 23077346 ~ 23119231 (+)
LOC110538306 LOC106605606 coding upstream 70505 23055781 ~ 23069547 (+)
LOC110538188 LOC106578351 coding upstream 142678 22993751 ~ 22997374 (+)
LOC110538314 trp-iii coding upstream 281980 22856570 ~ 22858072 (+)
LOC110538332 LOC106605607 coding downstream 7961 23148505 ~ 23151891 (+)
si:dkey-238d18.4 LOC106605609 coding downstream 95676 23236220 ~ 23245933 (+)
hsc70 hsp70-3 coding downstream 106008 23246552 ~ 23251865 (+)
LOC110538364 ctrl coding downstream 112290 23252834 ~ 23255257 (+)
LOC110538320 LOC106605612 coding downstream 120559 23261103 ~ 23261862 (+)
G122632 NA non-coding upstream 12126 23127682 ~ 23127926 (+)
G122630 NA non-coding upstream 22844 23116765 ~ 23117208 (+)
G122617 NA non-coding upstream 42093 23097430 ~ 23097959 (+)
G122593 NA non-coding upstream 88958 23050783 ~ 23051094 (+)
G122667 NA non-coding downstream 45147 23185691 ~ 23199253 (+)
G123471 NA non-coding downstream 118275 23258819 ~ 23259033 (+)
G123473 NA non-coding downstream 119792 23260336 ~ 23260565 (+)
LOC110534494 LOC106577938 non-coding downstream 126820 23267159 ~ 23277132 (+)
G123464 LOC106577931 non-coding downstream 139595 23280139 ~ 23281470 (+)
G122459 LOC106578191 other upstream 328789 22810767 ~ 22811263 (+)
apoc4 NA other upstream 790116 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 793437 22342491 ~ 22346615 (+)
G122030 NA other upstream 1121237 22015130 ~ 22018815 (+)
LOC110537735 LOC106595974 other upstream 1314958 21821165 ~ 21825285 (+)
G123980 NA other downstream 684149 23824693 ~ 23825502 (+)
LOC110538497 LOC106605627 other downstream 721373 23861576 ~ 23881639 (+)
G124121 LOC106605585 other downstream 1006317 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 1400460 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 1732507 24873051 ~ 24873834 (+)

Expression


Co-expression Network