Gene
RNA
| Item | Value |
|---|---|
| gene id | G123473 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 23260336 ~ 23260565 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142637 | True | 230 | lncRNA | 0.42 | 1 | 23260336 | 23260565 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538364 | ctrl | coding | upstream | 5079 | 23252834 ~ 23255257 (+) |
| hsc70 | hsp70-3 | coding | upstream | 8471 | 23246552 ~ 23251865 (+) |
| si:dkey-238d18.4 | LOC106605609 | coding | upstream | 14403 | 23236220 ~ 23245933 (+) |
| LOC110538332 | LOC106605607 | coding | upstream | 108445 | 23148505 ~ 23151891 (+) |
| LOC110538208 | smg9 | coding | upstream | 124481 | 23128236 ~ 23135855 (+) |
| LOC110538320 | LOC106605612 | coding | downstream | 538 | 23261103 ~ 23261862 (+) |
| LOC110534494 | LOC106577938 | coding | downstream | 6594 | 23267159 ~ 23277132 (+) |
| LOC110538034 | kmt2b | coding | downstream | 21999 | 23282564 ~ 23343892 (+) |
| LOC118944131 | LOC106605615 | coding | downstream | 100018 | 23360583 ~ 23365429 (+) |
| LOC110534504 | NA | coding | downstream | 130695 | 23391260 ~ 23391711 (+) |
| G123471 | NA | non-coding | upstream | 1303 | 23258819 ~ 23259033 (+) |
| G122667 | NA | non-coding | upstream | 61083 | 23185691 ~ 23199253 (+) |
| G122637 | NA | non-coding | upstream | 119792 | 23140052 ~ 23140544 (+) |
| G122632 | NA | non-coding | upstream | 132410 | 23127682 ~ 23127926 (+) |
| kcnn4 | LOC106578046 | non-coding | upstream | 141362 | 23077346 ~ 23119231 (+) |
| G123464 | LOC106577931 | non-coding | downstream | 19574 | 23280139 ~ 23281470 (+) |
| G123507 | NA | non-coding | downstream | 106208 | 23366773 ~ 23367017 (+) |
| G123508 | NA | non-coding | downstream | 106931 | 23367496 ~ 23367957 (+) |
| G123518 | NA | non-coding | downstream | 117044 | 23377609 ~ 23390811 (+) |
| G122459 | LOC106578191 | other | upstream | 449073 | 22810767 ~ 22811263 (+) |
| apoc4 | NA | other | upstream | 910400 | 22348543 ~ 22349936 (+) |
| LOC110537939 | apoc1 | other | upstream | 913721 | 22342491 ~ 22346615 (+) |
| G122030 | NA | other | upstream | 1241521 | 22015130 ~ 22018815 (+) |
| LOC110537735 | LOC106595974 | other | upstream | 1435242 | 21821165 ~ 21825285 (+) |
| G123980 | NA | other | downstream | 564128 | 23824693 ~ 23825502 (+) |
| LOC110538497 | LOC106605627 | other | downstream | 601352 | 23861576 ~ 23881639 (+) |
| G124121 | LOC106605585 | other | downstream | 886296 | 24146861 ~ 24148593 (+) |
| LOC110538915 | LOC106605649 | other | downstream | 1280439 | 24540963 ~ 24544247 (+) |
| G124451 | LOC106578403 | other | downstream | 1612486 | 24873051 ~ 24873834 (+) |
