G123980


Basic Information

Item Value
gene id G123980
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 23824693 ~ 23825502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU143220
tatggttactggACTATCTGATCATAGTCTGAGACTTATAGCCAGAAAGCTGTCTAAgagcaggtttaacctctctactgttagaaagccggATCAACTCAGAATACCTAAGAGTGAATTAAGCTATTTCGAAAATGCAATTAAGGGAATTaactggaatgatctcttgtcccatacagacgtggaagctgatagtcaggtttttctatccacaatccagactacaataaatggtttcctaaagaaaatcaaatccaaacctggccaaaagagcactcttccttggctaaatggagaaatctggaaattgatgaaagaacgagattacgctctaaaaatagccctaagatccaaattagagcatgacagaAGTAGGTTTACGATGGTTGAGAAATCAGGTGATGAAAGAaaatcagacaggccaaggcaaacgtttttattaacataattggtgaagcaaagggaaattctaaactgatctgggagaatctaaaaaaagttaacagggaaagaccatagtacactgcaaaaagactagaaatcatggtgaataacaatctaacacaggatgcagttgaaatagcaatagccttcaattcctactttattgactctgtcagggtactgacacagaaccaCTCCACTGgttcttgggctcagtgctagtgaatgacgctcaacctgtcttcatcataagggaggtttctgagtcaaaggtaaacaaggtgattagctcactaaagaactctaaagccaaataTGTGTTTAGGCTGGACTCTActtttcttaaaaactacaaagagtccctca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143220 True 810 TUCP 0.40 1 23824693 23825502

Neighbor

gene id symbol gene type direction distance location
LOC110538452 fxyd5b coding upstream 28843 23772587 ~ 23795850 (+)
nphs1 LOC106605624 coding upstream 65475 23699019 ~ 23759218 (+)
zmp:0000001114 LOC106605621 coding upstream 272356 23520890 ~ 23552337 (+)
LOC110538396 NA coding upstream 395200 23427269 ~ 23429493 (+)
LOC110534504 NA coding upstream 432982 23391260 ~ 23391711 (+)
LOC110538480 NA coding downstream 12335 23837837 ~ 23849316 (+)
LOC110538497 LOC106605627 coding downstream 36074 23861576 ~ 23881639 (+)
LOC110538531 NA coding downstream 59153 23882624 ~ 23887290 (+)
LOC110538544 LOC106605665 coding downstream 99066 23924568 ~ 23937034 (+)
LOC110538566 LOC106605629 coding downstream 121271 23946773 ~ 23969314 (+)
G123938 NA non-coding upstream 44675 23752549 ~ 23780018 (+)
G123907 NA non-coding upstream 145867 23678587 ~ 23678826 (+)
G123881 NA non-coding upstream 173204 23651264 ~ 23651489 (+)
G123858 NA non-coding upstream 200177 23624316 ~ 23624516 (+)
G123616 LOC106605622 non-coding upstream 260231 23562087 ~ 23564462 (+)
G124006 NA non-coding downstream 46036 23871538 ~ 23872183 (+)
G124017 NA non-coding downstream 66351 23891853 ~ 23892087 (+)
G124023 NA non-coding downstream 75768 23901270 ~ 23901553 (+)
G124024 NA non-coding downstream 77401 23902903 ~ 23903138 (+)
G122459 LOC106578191 other upstream 1013430 22810767 ~ 22811263 (+)
apoc4 NA other upstream 1474757 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 1478078 22342491 ~ 22346615 (+)
G122030 NA other upstream 1805878 22015130 ~ 22018815 (+)
LOC110537735 LOC106595974 other upstream 1999599 21821165 ~ 21825285 (+)
G124121 LOC106605585 other downstream 321359 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 715502 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 1047549 24873051 ~ 24873834 (+)
LOC110534557 LOC106605501 other downstream 1551982 25377221 ~ 25396334 (+)

Expression


Co-expression Network