Gene
RNA
| Item | Value |
|---|---|
| gene id | G124006 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 23871538 ~ 23872183 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110502468 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU143252 | True | 510 | lncRNA | 0.43 | 2 | 23871538 | 23872183 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538480 | NA | coding | upstream | 22222 | 23837837 ~ 23849316 (+) |
| LOC110538452 | fxyd5b | coding | upstream | 75688 | 23772587 ~ 23795850 (+) |
| nphs1 | LOC106605624 | coding | upstream | 112320 | 23699019 ~ 23759218 (+) |
| zmp:0000001114 | LOC106605621 | coding | upstream | 319201 | 23520890 ~ 23552337 (+) |
| LOC110538396 | NA | coding | upstream | 442045 | 23427269 ~ 23429493 (+) |
| LOC110538531 | NA | coding | downstream | 12472 | 23882624 ~ 23887290 (+) |
| LOC110538544 | LOC106605665 | coding | downstream | 52385 | 23924568 ~ 23937034 (+) |
| LOC110538566 | LOC106605629 | coding | downstream | 74590 | 23946773 ~ 23969314 (+) |
| LOC110538617 | NA | coding | downstream | 98227 | 23970410 ~ 23974958 (+) |
| LOC110538573 | fxyd9b | coding | downstream | 112136 | 23984319 ~ 23997362 (+) |
| G123938 | NA | non-coding | upstream | 91520 | 23752549 ~ 23780018 (+) |
| G123907 | NA | non-coding | upstream | 192712 | 23678587 ~ 23678826 (+) |
| G123881 | NA | non-coding | upstream | 220049 | 23651264 ~ 23651489 (+) |
| G123858 | NA | non-coding | upstream | 247022 | 23624316 ~ 23624516 (+) |
| G123616 | LOC106605622 | non-coding | upstream | 307076 | 23562087 ~ 23564462 (+) |
| G124017 | NA | non-coding | downstream | 19670 | 23891853 ~ 23892087 (+) |
| G124023 | NA | non-coding | downstream | 29087 | 23901270 ~ 23901553 (+) |
| G124024 | NA | non-coding | downstream | 30720 | 23902903 ~ 23903138 (+) |
| G124049 | NA | non-coding | downstream | 108643 | 23980826 ~ 23984060 (+) |
| G123980 | NA | other | upstream | 46036 | 23824693 ~ 23825502 (+) |
| G122459 | LOC106578191 | other | upstream | 1060275 | 22810767 ~ 22811263 (+) |
| apoc4 | NA | other | upstream | 1521602 | 22348543 ~ 22349936 (+) |
| LOC110537939 | apoc1 | other | upstream | 1524923 | 22342491 ~ 22346615 (+) |
| G122030 | NA | other | upstream | 1852723 | 22015130 ~ 22018815 (+) |
| G124121 | LOC106605585 | other | downstream | 274678 | 24146861 ~ 24148593 (+) |
| LOC110538915 | LOC106605649 | other | downstream | 668821 | 24540963 ~ 24544247 (+) |
| G124451 | LOC106578403 | other | downstream | 1000868 | 24873051 ~ 24873834 (+) |
| LOC110534557 | LOC106605501 | other | downstream | 1505301 | 25377221 ~ 25396334 (+) |
| G125934 | NA | other | downstream | 1810697 | 25682880 ~ 25757853 (+) |
