G124080


Basic Information

Item Value
gene id G124080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24027437 ~ 24027655 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU143328
tgATCAGCATGCACTTGCCCGGCCCGACACAAGattcgctagtgcgcgatgagacaaggatatccctaccggccaaaccctccctaacccggacgaggctaggccaattgtgcgtcaccccatggacctccctgtcgcggccggctgcgacagagcctgggctcgaacccagagtctctggtggcacagctaccactgcaatgcagtgccttagaccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143328 True 219 lncRNA 0.61 1 24027437 24027655

Neighbor

gene id symbol gene type direction distance location
LOC110538629 LOC106605631 coding upstream 11493 24001565 ~ 24015944 (+)
LOC110538573 fxyd9b coding upstream 30075 23984319 ~ 23997362 (+)
LOC110538617 NA coding upstream 52479 23970410 ~ 23974958 (+)
LOC110538566 LOC106605629 coding upstream 58123 23946773 ~ 23969314 (+)
LOC110538544 LOC106605665 coding upstream 90403 23924568 ~ 23937034 (+)
LOC100136301 LOC106605632 coding downstream 14026 24041681 ~ 24054664 (+)
LOC100135863 LOC106577739 coding downstream 41714 24069369 ~ 24076225 (+)
tmem147 LOC106605633 coding downstream 50020 24077675 ~ 24081015 (+)
LOC110538661 LOC106605634 coding downstream 78989 24106644 ~ 24124814 (+)
LOC110538727 LOC106605639 coding downstream 163235 24190890 ~ 24200234 (+)
G124079 NA non-coding upstream 1348 24025804 ~ 24026089 (+)
G124069 NA non-coding upstream 36603 23988981 ~ 23990834 (+)
G124049 NA non-coding upstream 43377 23980826 ~ 23984060 (+)
G124024 NA non-coding upstream 124299 23902903 ~ 23903138 (+)
G124023 NA non-coding upstream 125884 23901270 ~ 23901553 (+)
G124087 NA non-coding downstream 28168 24055823 ~ 24056120 (+)
G124113 NA non-coding downstream 87792 24115447 ~ 24115658 (+)
G124115 NA non-coding downstream 89577 24117232 ~ 24117456 (+)
G124119 NA non-coding downstream 101943 24129598 ~ 24129956 (+)
G124122 LOC106578386 non-coding downstream 118411 24146066 ~ 24146722 (+)
LOC110538497 LOC106605627 other upstream 145801 23861576 ~ 23881639 (+)
G123980 NA other upstream 201935 23824693 ~ 23825502 (+)
G122459 LOC106578191 other upstream 1216174 22810767 ~ 22811263 (+)
apoc4 NA other upstream 1677501 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 1680822 22342491 ~ 22346615 (+)
G124121 LOC106605585 other downstream 119206 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 513349 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 845396 24873051 ~ 24873834 (+)
LOC110534557 LOC106605501 other downstream 1349829 25377221 ~ 25396334 (+)
G125934 NA other downstream 1655225 25682880 ~ 25757853 (+)

Expression


Co-expression Network