Gene
RNA
| Item | Value |
|---|---|
| gene id | G124122 |
| gene name | LOC106578386 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 24146066 ~ 24146722 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| IgGFc-binding protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU143373 | True | 657 | lncRNA | 0.48 | 1 | 24146066 | 24146722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538661 | LOC106605634 | coding | upstream | 21252 | 24106644 ~ 24124814 (+) |
| tmem147 | LOC106605633 | coding | upstream | 65051 | 24077675 ~ 24081015 (+) |
| LOC100135863 | LOC106577739 | coding | upstream | 69841 | 24069369 ~ 24076225 (+) |
| LOC100136301 | LOC106605632 | coding | upstream | 91402 | 24041681 ~ 24054664 (+) |
| LOC110538629 | LOC106605631 | coding | upstream | 130122 | 24001565 ~ 24015944 (+) |
| LOC110538727 | LOC106605639 | coding | downstream | 44168 | 24190890 ~ 24200234 (+) |
| LOC110538747 | LOC106578439 | coding | downstream | 54377 | 24201099 ~ 24238678 (+) |
| LOC110538776 | LOC106605668 | coding | downstream | 113666 | 24260388 ~ 24270406 (+) |
| LOC110538793 | LOC106605640 | coding | downstream | 149445 | 24296167 ~ 24320738 (+) |
| LOC110538837 | fbrl | coding | downstream | 192003 | 24338725 ~ 24342581 (+) |
| G124119 | NA | non-coding | upstream | 16110 | 24129598 ~ 24129956 (+) |
| G124115 | NA | non-coding | upstream | 28610 | 24117232 ~ 24117456 (+) |
| G124113 | NA | non-coding | upstream | 30408 | 24115447 ~ 24115658 (+) |
| G124087 | NA | non-coding | upstream | 89946 | 24055823 ~ 24056120 (+) |
| G124080 | NA | non-coding | upstream | 118411 | 24027437 ~ 24027655 (+) |
| G124124 | LOC106605585 | non-coding | downstream | 2371 | 24149093 ~ 24154800 (+) |
| G124130 | NA | non-coding | downstream | 15843 | 24162565 ~ 24162813 (+) |
| G124132 | NA | non-coding | downstream | 16973 | 24163695 ~ 24163901 (+) |
| G124139 | NA | non-coding | downstream | 25448 | 24172170 ~ 24172474 (+) |
| G124117 | NA | non-coding | downstream | 30124 | 24176846 ~ 24177151 (+) |
| LOC110538497 | LOC106605627 | other | upstream | 264430 | 23861576 ~ 23881639 (+) |
| G123980 | NA | other | upstream | 320564 | 23824693 ~ 23825502 (+) |
| G122459 | LOC106578191 | other | upstream | 1334803 | 22810767 ~ 22811263 (+) |
| apoc4 | NA | other | upstream | 1796130 | 22348543 ~ 22349936 (+) |
| LOC110537939 | apoc1 | other | upstream | 1799451 | 22342491 ~ 22346615 (+) |
| G124121 | LOC106605585 | other | downstream | 139 | 24146861 ~ 24148593 (+) |
| LOC110538915 | LOC106605649 | other | downstream | 394282 | 24540963 ~ 24544247 (+) |
| G124451 | LOC106578403 | other | downstream | 726329 | 24873051 ~ 24873834 (+) |
| LOC110534557 | LOC106605501 | other | downstream | 1230762 | 25377221 ~ 25396334 (+) |
| G125934 | NA | other | downstream | 1536158 | 25682880 ~ 25757853 (+) |
