G124943


Basic Information

Item Value
gene id G124943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24237651 ~ 24238511 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU144348
gtatgtatatatatttaattttaatataataaataattgTCTGgattttcagtgtaaacttaaattaCTAAAAAGAGATGTGAATTATGTAGaaagataatggacctatatatttttttaataagatcatctttgagaactaaccaTCACTCAAATAAAAGCTAGATACAGGGAGAATCTACAATGCATAAAATGATGCATTCAGGAGTTTTTGTCATGGCATGGGGCCACAATAGTTTTTTTGAATTGGTGATGTGCTTTAAAACTGCTACATTCTGTCACTGCGGCCAACAGAAGGGCCTCTAAAATGGTTGCTCGGCCACCATTGGCCACGCCCACCACCTAAGCACATTTTGATCCAGAAAAGACCCTGGCAGCCATtttcctttctttttctttcATAAACACTCACAACAACAGTCTGCTCTGGAATGTTTTCAAATCTAAGCCACTTTTCGGTTCATCTCGTTGATCTCTTCTTCCTCATGGGTCCAGTGGTTGCAGGTGTGAAATGGTGATAGGCCCCAGGGAATGTTCAAACAGGAAACTGGACTTTATGTCTAGCTACCCCAGAATGCCTTGCCCTCATTTCTAAACATGACCGGTTGTCTCACGTTTCCAGGAAGGCTTTCTATCGTCCTGTTCCCTTTCTCTGTGGACCATGAGAGTTTTACATGGTCTCTtcctaactctttctctctctttcacattcAGTCTGATAGGGTACAGCGTGTAAAAGTCTACTTTGCGCTCCTCCTCAGCAGTAGCTGCGTGTCTGACCCTCAGTATGGATGGTCCAGTTGGGTGATGGTCCAGGTAAGCTGCCCTGCCG

Function

NR:

description
PREDICTED: rho GTPase-activating protein 33 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144348 True 832 lncRNA 0.42 2 24237651 24238511

Neighbor

gene id symbol gene type direction distance location
LOC110538717 LOC106578554 coding downstream 53479 24178523 ~ 24184172 (-)
LOC110538705 LOC106577653 coding downstream 64815 24144519 ~ 24172836 (-)
LOC118938710 LOC106605635 coding downstream 97983 24138846 ~ 24139668 (-)
LOC110538681 LOC106605635 coding downstream 106048 24124948 ~ 24131603 (-)
LOC110533695 NA coding downstream 146187 24084443 ~ 24091464 (-)
LOC110538767 LOC106605667 coding upstream 11351 24249862 ~ 24253101 (-)
LOC110538859 LOC106578507 coding upstream 241754 24480265 ~ 24492482 (-)
LOC100301652 LOC100301652 coding upstream 265295 24503806 ~ 24504593 (-)
LOC110538887 LOC106605647 coding upstream 292913 24531424 ~ 24540898 (-)
LOC110538978 LOC106605653 coding upstream 345882 24584393 ~ 24601385 (-)
G124944 NA non-coding downstream 60516 24176850 ~ 24177135 (-)
G124958 NA non-coding downstream 64212 24173226 ~ 24173439 (-)
G124947 NA non-coding downstream 107964 24129417 ~ 24129687 (-)
G124935 NA non-coding downstream 117583 24119691 ~ 24120068 (-)
G124994 NA non-coding upstream 16145 24254656 ~ 24254894 (-)
G124995 NA non-coding upstream 17229 24255740 ~ 24256041 (-)
G125010 NA non-coding upstream 39748 24278259 ~ 24278499 (-)
G125032 NA non-coding upstream 69867 24308378 ~ 24308833 (-)
G125041 NA non-coding upstream 84453 24322964 ~ 24323238 (-)
G124840 NA other downstream 332974 23903839 ~ 23904677 (-)
LOC110538355 LOC106577931 other downstream 955853 23279116 ~ 23281851 (-)
G123435 NA other downstream 1038399 23185640 ~ 23199252 (-)
G123308 NA other downstream 1231839 23004986 ~ 23005812 (-)
G125003 NA other upstream 30715 24269226 ~ 24270136 (-)
G125043 NA other upstream 86069 24324580 ~ 24324836 (-)
G125305 NA other upstream 536709 24775220 ~ 24776627 (-)
G127083 NA other upstream 2323103 26561614 ~ 26562127 (-)

Expression


Co-expression Network