G124228


Basic Information

Item Value
gene id G124228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24327939 ~ 24328279 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU143520
gcattgtttaaagtggctagtgatacatttttacatcaatttccattattaaagtggctgaagttgagtcagtatgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtccctgctttgatgcacctgtactgacctcgccttctggatgatagcagggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttatggccttcctgtgacatcaggtggtgtaggtgtcctggagggcaggtagtttgcccccggtgatgcgttgtgcagacctcactaccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143520 True 341 lncRNA 0.49 1 24327939 24328279

Neighbor

gene id symbol gene type direction distance location
LOC110538793 LOC106605640 coding upstream 7201 24296167 ~ 24320738 (+)
LOC110538776 LOC106605668 coding upstream 57533 24260388 ~ 24270406 (+)
LOC110538747 LOC106578439 coding upstream 89261 24201099 ~ 24238678 (+)
LOC110538727 LOC106605639 coding upstream 127705 24190890 ~ 24200234 (+)
LOC110538661 LOC106605634 coding upstream 203125 24106644 ~ 24124814 (+)
LOC110538837 fbrl coding downstream 10446 24338725 ~ 24342581 (+)
LOC110538803 LOC106605641 coding downstream 15602 24343881 ~ 24467486 (+)
LOC118938711 NA coding downstream 141181 24469460 ~ 24472368 (+)
LOC110538847 LOC106578478 coding downstream 148011 24476290 ~ 24480163 (+)
LOC110538870 LOC106578482 coding downstream 180131 24508410 ~ 24524635 (+)
G124225 NA non-coding upstream 3403 24324298 ~ 24324536 (+)
G124176 NA non-coding upstream 71443 24256196 ~ 24256496 (+)
G124175 NA non-coding upstream 71888 24255745 ~ 24256051 (+)
G124170 NA non-coding upstream 74850 24250939 ~ 24253089 (+)
G124146 NA non-coding upstream 77539 24245563 ~ 24250400 (+)
G124229 NA non-coding downstream 518 24328797 ~ 24329007 (+)
G124249 NA non-coding downstream 45906 24374185 ~ 24374593 (+)
G124268 NA non-coding downstream 144995 24473274 ~ 24473563 (+)
G124270 NA non-coding downstream 151986 24480265 ~ 24492460 (+)
G124121 LOC106605585 other upstream 179346 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 446303 23861576 ~ 23881639 (+)
G123980 NA other upstream 502437 23824693 ~ 23825502 (+)
G122459 LOC106578191 other upstream 1516676 22810767 ~ 22811263 (+)
apoc4 NA other upstream 1978003 22348543 ~ 22349936 (+)
LOC110538915 LOC106605649 other downstream 212725 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 544772 24873051 ~ 24873834 (+)
LOC110534557 LOC106605501 other downstream 1049205 25377221 ~ 25396334 (+)
G125934 NA other downstream 1354601 25682880 ~ 25757853 (+)
G126387 LOC105417071 other downstream 1721571 26049850 ~ 26050104 (+)

Expression


Co-expression Network