G125192 (LOC106605651)


Basic Information

Item Value
gene id G125192
gene name LOC106605651
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24569913 ~ 24570690 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU144630
AGTAAGGCAATTGAATATACAGTCTCAATTTAAGACAGACAGGTAGTAAAGTACACTATAAAACATAAACAGGAATTCTGGGGGTAACATTTCACTGGTATTTTGATAACTGTTTAGTTACtttggagagaagggagagatacTGTGGTGGTAGATGTATTCTATGCTGATGCGTAAACTACATAGTTTATGCCATATCCATAGCCTAAGGACTTGAGGATAACAAACAGACAAAAATAACATCCATTaatgaaaaacaaacatttaaaagtTCCGTTCCAGTCACTAGTCAGTCTCTTCGGGTGCTGTTATAGTTATAGGGACACGGCCACGGTGGCCACGGTCATATTGCGCTGGGACTCGTAGGAACCCATCTGTCCGGTCTAATTCTGGCAACGGGGACACGTGACAGTAGGTGGGTAACCGGAGATCATATCGGAACCCGCGGCTGTCGAACGCCTTGTCGTTGAGGGAGTACAGCTTGTCCGCGATGTCATTCCGCACCACGAGCGCAAAGACCTTGGCGATGTAGCGGTGTTTGGCGAAGAGTAGGTACAGTTTCTTACGTCTCCAAGAAACGTATCTACAGCAATTATCTGCAC

Function

NR:

description
popeye domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144630 True 602 lncRNA 0.45 2 24569913 24570690

Neighbor

gene id symbol gene type direction distance location
LOC110538887 LOC106605647 coding downstream 29015 24531424 ~ 24540898 (-)
LOC100301652 LOC100301652 coding downstream 65320 24503806 ~ 24504593 (-)
LOC110538859 LOC106578507 coding downstream 77431 24480265 ~ 24492482 (-)
LOC110538767 LOC106605667 coding downstream 316812 24249862 ~ 24253101 (-)
LOC110538717 LOC106578554 coding downstream 385741 24178523 ~ 24184172 (-)
LOC110538978 LOC106605653 coding upstream 13703 24584393 ~ 24601385 (-)
LOC110538828 grik2 coding upstream 292216 24862906 ~ 25110583 (-)
LOC110533704 cep162 coding upstream 846750 25417440 ~ 25427699 (-)
LOC110539072 cep162 coding upstream 858293 25428983 ~ 25443516 (-)
si:ch211-198c19.1 LOC106605502 coding upstream 888864 25459554 ~ 25460882 (-)
G125126 NA non-coding downstream 97558 24472013 ~ 24472355 (-)
G125123 NA non-coding downstream 99929 24469753 ~ 24469984 (-)
G125083 NA non-coding downstream 149009 24394855 ~ 24420904 (-)
G125101 NA non-coding downstream 160109 24404413 ~ 24409804 (-)
G125078 NA non-coding downstream 187002 24381406 ~ 24382911 (-)
G125220 NA non-coding upstream 51713 24622403 ~ 24622633 (-)
G125230 NA non-coding upstream 63076 24633766 ~ 24685283 (-)
G125244 NA non-coding upstream 77873 24648563 ~ 24650144 (-)
G125273 NA non-coding upstream 136784 24707474 ~ 24707709 (-)
G125325 NA non-coding upstream 242954 24813644 ~ 24834540 (-)
G125043 NA other downstream 245077 24324580 ~ 24324836 (-)
G125003 NA other downstream 299777 24269226 ~ 24270136 (-)
LOC110538705 LOC106577653 other downstream 408470 24144519 ~ 24172836 (-)
G124840 NA other downstream 665236 23903839 ~ 23904677 (-)
G125305 NA other upstream 204530 24775220 ~ 24776627 (-)
G127083 NA other upstream 1990924 26561614 ~ 26562127 (-)
LOC110539285 LOC106579350 other upstream 2080686 26641958 ~ 26675649 (-)
LOC110485245 ubr5 other upstream 2700570 27231538 ~ 27278158 (-)
G129250 NA other upstream 3195467 27766157 ~ 27766532 (-)

Expression


Co-expression Network