G125244


Basic Information

Item Value
gene id G125244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24648563 ~ 24650144 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU144684
actgttgaacagcttcaattagcagaccatcagactgctgaacagcttctattaccaggccatcagactgttgaacagcttcaattagcagaccatcagactgttgaacagcttctattaccaggccatcagactgttgaacagcttctattaccagaccatcagacggttgaacagcttcaattaccagaccatcagactgctgaacagcttctattaccaggccatcagactgttgaacagcttccattaccagaccatcagactgctgaacagcttctattaccaggccatcagactgttgaacagcttcaattaccaggccatcagactgttgaacagcttctattaccaggccatcagacaaTGAACAGCTTccattaccagaccatcagactgttgaacagcttctagaccatcagattgctgaacagcttctattaccaggccatcagactgttgaacagcttccattaccagaccatcagactgctgaacagcttctattaccaggccatcagactgttgaacagcttc

Function

NR:

description
probable JmjC domain-containing histone demethylation protein 2C, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144684 True 537 lncRNA 0.35 2 24648563 24650144

Neighbor

gene id symbol gene type direction distance location
LOC110538978 LOC106605653 coding downstream 47178 24584393 ~ 24601385 (-)
LOC110538887 LOC106605647 coding downstream 107665 24531424 ~ 24540898 (-)
LOC100301652 LOC100301652 coding downstream 143970 24503806 ~ 24504593 (-)
LOC110538859 LOC106578507 coding downstream 156081 24480265 ~ 24492482 (-)
LOC110538767 LOC106605667 coding downstream 395462 24249862 ~ 24253101 (-)
LOC110538828 grik2 coding upstream 212762 24862906 ~ 25110583 (-)
LOC110533704 cep162 coding upstream 767296 25417440 ~ 25427699 (-)
LOC110539072 cep162 coding upstream 778839 25428983 ~ 25443516 (-)
si:ch211-198c19.1 LOC106605502 coding upstream 809410 25459554 ~ 25460882 (-)
LOC110539098 LOC106605503 coding upstream 1018882 25669026 ~ 25790259 (-)
G125220 NA non-coding downstream 25930 24622403 ~ 24622633 (-)
G125192 LOC106605651 non-coding downstream 77873 24569913 ~ 24570690 (-)
G125126 NA non-coding downstream 176208 24472013 ~ 24472355 (-)
G125123 NA non-coding downstream 178579 24469753 ~ 24469984 (-)
G125101 NA non-coding downstream 238759 24404413 ~ 24409804 (-)
G125273 NA non-coding upstream 57330 24707474 ~ 24707709 (-)
G125325 NA non-coding upstream 163500 24813644 ~ 24834540 (-)
G125347 NA non-coding upstream 205498 24855642 ~ 24856067 (-)
G125352 NA non-coding upstream 224725 24874869 ~ 24879348 (-)
G125388 NA non-coding upstream 304761 24954905 ~ 24956029 (-)
G125043 NA other downstream 323727 24324580 ~ 24324836 (-)
G125003 NA other downstream 378427 24269226 ~ 24270136 (-)
LOC110538705 LOC106577653 other downstream 487120 24144519 ~ 24172836 (-)
G124840 NA other downstream 743886 23903839 ~ 23904677 (-)
G125305 NA other upstream 125076 24775220 ~ 24776627 (-)
G127083 NA other upstream 1911470 26561614 ~ 26562127 (-)
LOC110539285 LOC106579350 other upstream 2001232 26641958 ~ 26675649 (-)
LOC110485245 ubr5 other upstream 2621116 27231538 ~ 27278158 (-)
G129250 NA other upstream 3116013 27766157 ~ 27766532 (-)

Expression


Co-expression Network