G124579


Basic Information

Item Value
gene id G124579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25116088 ~ 25116385 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU143909
catattatggacagctcaaataagtaaagataaacgacagtccatcattactttaagacatgaaggtcagtcaatacagataatttaaagaactttgaaagtttcttcatgtgcagtcgcaaaaaccatcaagtgctatgatgaaactggctctaatgaggaacgccacaggaatggaagacccagagttacctctgctgcagaggatacgtttattagagttaccagcctcagaaattgcagcccaaataaacgcttcacagagttcaagtaacagacacatctcaacatcaactgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143909 True 298 lncRNA 0.39 1 25116088 25116385

Neighbor

gene id symbol gene type direction distance location
LOC110538989 NA coding upstream 392715 24685282 ~ 24723373 (+)
LOC118936392 NA coding upstream 431638 24622269 ~ 24684450 (+)
LOC110534541 hace1 coding upstream 494671 24605074 ~ 24621417 (+)
LOC110538967 LOC106605650 coding upstream 537972 24571084 ~ 24578116 (+)
LOC110538956 LOC106605651 coding upstream 545347 24568487 ~ 24570741 (+)
ascc3 ascc3 coding downstream 34631 25151016 ~ 25291524 (+)
LOC110534548 LOC106579462 coding downstream 178258 25294643 ~ 25325656 (+)
LOC110534557 LOC106605501 coding downstream 260836 25377221 ~ 25396334 (+)
LOC110539045 mrap2 coding downstream 287048 25403433 ~ 25414375 (+)
tsnare1 LOC106605505 coding downstream 715018 25831403 ~ 25974877 (+)
G124454 NA non-coding upstream 215020 24879532 ~ 24901068 (+)
G124459 NA non-coding upstream 224552 24885630 ~ 24891536 (+)
G124440 NA non-coding upstream 260031 24855637 ~ 24856057 (+)
G124437 NA non-coding upstream 271550 24844216 ~ 24844538 (+)
G124366 NA non-coding upstream 373915 24713062 ~ 24742173 (+)
G124580 NA non-coding downstream 1204 25117589 ~ 25117895 (+)
G124584 NA non-coding downstream 10568 25126953 ~ 25127181 (+)
G124616 NA non-coding downstream 77021 25193406 ~ 25194000 (+)
G124635 NA non-coding downstream 107513 25223898 ~ 25231068 (+)
G124650 NA non-coding downstream 146012 25262397 ~ 25263656 (+)
G124451 LOC106578403 other upstream 242254 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 571862 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 967495 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 1234452 23861576 ~ 23881639 (+)
G123980 NA other upstream 1290586 23824693 ~ 23825502 (+)
G125934 NA other downstream 566495 25682880 ~ 25757853 (+)
G126387 LOC105417071 other downstream 933465 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 1510464 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 1677825 26794210 ~ 26795762 (+)

Expression


Co-expression Network