G124580


Basic Information

Item Value
gene id G124580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25117589 ~ 25117895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU143910
GTgtatattcttatcccattcctttacaagagtgtgtgtattaggtgttgttgtggaatttgttggatattaggttttgttgtggaattgttagatattacctgttagatactgctgcactgtcagatctagaagcataagcattttgctacactcacaataacatctgctaaccatgtgtatgtgaccaatacaatttgatttgatttgataaacatCTTTCAAAGCATGCATACAGAGAACTCAATATGAACTGCATACAATCCTGTCCTGACTCACAACCTGTGCAACAGATAAAGGGGAGAAt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143910 True 307 lncRNA 0.43 1 25117589 25117895

Neighbor

gene id symbol gene type direction distance location
LOC110538989 NA coding upstream 394216 24685282 ~ 24723373 (+)
LOC118936392 NA coding upstream 433139 24622269 ~ 24684450 (+)
LOC110534541 hace1 coding upstream 496172 24605074 ~ 24621417 (+)
LOC110538967 LOC106605650 coding upstream 539473 24571084 ~ 24578116 (+)
LOC110538956 LOC106605651 coding upstream 546848 24568487 ~ 24570741 (+)
ascc3 ascc3 coding downstream 33121 25151016 ~ 25291524 (+)
LOC110534548 LOC106579462 coding downstream 176748 25294643 ~ 25325656 (+)
LOC110534557 LOC106605501 coding downstream 259326 25377221 ~ 25396334 (+)
LOC110539045 mrap2 coding downstream 285538 25403433 ~ 25414375 (+)
tsnare1 LOC106605505 coding downstream 713508 25831403 ~ 25974877 (+)
G124579 NA non-coding upstream 1204 25116088 ~ 25116385 (+)
G124454 NA non-coding upstream 216521 24879532 ~ 24901068 (+)
G124459 NA non-coding upstream 226053 24885630 ~ 24891536 (+)
G124440 NA non-coding upstream 261532 24855637 ~ 24856057 (+)
G124437 NA non-coding upstream 273051 24844216 ~ 24844538 (+)
G124584 NA non-coding downstream 9058 25126953 ~ 25127181 (+)
G124616 NA non-coding downstream 75511 25193406 ~ 25194000 (+)
G124635 NA non-coding downstream 106003 25223898 ~ 25231068 (+)
G124650 NA non-coding downstream 144502 25262397 ~ 25263656 (+)
G124651 NA non-coding downstream 146876 25264771 ~ 25266001 (+)
G124451 LOC106578403 other upstream 243755 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 573363 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 968996 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 1235953 23861576 ~ 23881639 (+)
G123980 NA other upstream 1292087 23824693 ~ 23825502 (+)
G125934 NA other downstream 564985 25682880 ~ 25757853 (+)
G126387 LOC105417071 other downstream 931955 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 1508954 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 1676315 26794210 ~ 26795762 (+)

Expression


Co-expression Network