Gene
RNA
| Item | Value |
|---|---|
| gene id | G124635 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 25223898 ~ 25231068 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proline-rich extensin-like protein EPR1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU143992 | True | 655 | lncRNA | 0.45 | 2 | 25223898 | 25231068 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538989 | NA | coding | upstream | 500525 | 24685282 ~ 24723373 (+) |
| LOC118936392 | NA | coding | upstream | 539448 | 24622269 ~ 24684450 (+) |
| LOC110534541 | hace1 | coding | upstream | 602481 | 24605074 ~ 24621417 (+) |
| LOC110538967 | LOC106605650 | coding | upstream | 645782 | 24571084 ~ 24578116 (+) |
| LOC110538956 | LOC106605651 | coding | upstream | 653157 | 24568487 ~ 24570741 (+) |
| LOC110534548 | LOC106579462 | coding | downstream | 63575 | 25294643 ~ 25325656 (+) |
| LOC110534557 | LOC106605501 | coding | downstream | 146153 | 25377221 ~ 25396334 (+) |
| LOC110539045 | mrap2 | coding | downstream | 172365 | 25403433 ~ 25414375 (+) |
| tsnare1 | LOC106605505 | coding | downstream | 600335 | 25831403 ~ 25974877 (+) |
| LOC110539113 | LOC106605506 | coding | downstream | 868075 | 26099143 ~ 26113953 (+) |
| G124616 | NA | non-coding | upstream | 29898 | 25193406 ~ 25194000 (+) |
| G124584 | NA | non-coding | upstream | 96717 | 25126953 ~ 25127181 (+) |
| G124580 | NA | non-coding | upstream | 106003 | 25117589 ~ 25117895 (+) |
| G124579 | NA | non-coding | upstream | 107513 | 25116088 ~ 25116385 (+) |
| G124454 | NA | non-coding | upstream | 322830 | 24879532 ~ 24901068 (+) |
| G124650 | NA | non-coding | downstream | 31329 | 25262397 ~ 25263656 (+) |
| G124651 | NA | non-coding | downstream | 33703 | 25264771 ~ 25266001 (+) |
| G124659 | NA | non-coding | downstream | 54600 | 25285668 ~ 25337181 (+) |
| G124702 | NA | non-coding | downstream | 127572 | 25358640 ~ 25358874 (+) |
| G124451 | LOC106578403 | other | upstream | 350064 | 24873051 ~ 24873834 (+) |
| LOC110538915 | LOC106605649 | other | upstream | 679672 | 24540963 ~ 24544247 (+) |
| G124121 | LOC106605585 | other | upstream | 1075305 | 24146861 ~ 24148593 (+) |
| LOC110538497 | LOC106605627 | other | upstream | 1342262 | 23861576 ~ 23881639 (+) |
| G123980 | NA | other | upstream | 1398396 | 23824693 ~ 23825502 (+) |
| G125934 | NA | other | downstream | 451812 | 25682880 ~ 25757853 (+) |
| G126387 | LOC105417071 | other | downstream | 818782 | 26049850 ~ 26050104 (+) |
| G126727 | LOC106581475 | other | downstream | 1395781 | 26626849 ~ 26628649 (+) |
| G127190 | cf113 | other | downstream | 1563142 | 26794210 ~ 26795762 (+) |
