G125686


Basic Information

Item Value
gene id G125686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25433764 ~ 25433978 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145163
GGAATGAATAATGTTTTTGGGGAGAACCAGCTATGAAGCCAGCAATATTTTCATATCACAAACAAGGTACTAGGGTAGTGAATTGATGTTAGCTTCAGCTGTAAACTAGCAAGGCAAGTTAGCCTACAAACGGTATCTTcttgcattgtaaagtgttctagcCTGTAATAGACATTGTTTTGCTAACAGTAATTAACAGTTAAATAATGCAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145163 True 215 lncRNA 0.36 1 25433764 25433978

Neighbor

gene id symbol gene type direction distance location
LOC110539045 mrap2 coding upstream 19389 25403433 ~ 25414375 (+)
LOC110534557 LOC106605501 coding upstream 37430 25377221 ~ 25396334 (+)
LOC110534548 LOC106579462 coding upstream 108108 25294643 ~ 25325656 (+)
ascc3 ascc3 coding upstream 142240 25151016 ~ 25291524 (+)
LOC110538989 NA coding upstream 710391 24685282 ~ 24723373 (+)
tsnare1 LOC106605505 coding downstream 397425 25831403 ~ 25974877 (+)
LOC110539113 LOC106605506 coding downstream 665165 26099143 ~ 26113953 (+)
cdk14 LOC106605507 coding downstream 689735 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding downstream 889029 26323007 ~ 26326895 (+)
LOC110539173 LOC106605512 coding downstream 1018703 26452681 ~ 26547503 (+)
G125685 NA non-coding upstream 162 25433382 ~ 25433602 (+)
G125684 NA non-coding upstream 1329 25432200 ~ 25432435 (+)
G125683 cep162 non-coding upstream 3518 25429742 ~ 25430246 (+)
G125675 cep162 non-coding upstream 11145 25422012 ~ 25422619 (+)
G125668 NA non-coding upstream 16264 25417120 ~ 25417500 (+)
G125724 LOC106605502 non-coding downstream 25648 25459626 ~ 25460855 (+)
G125729 NA non-coding downstream 31124 25465102 ~ 25465351 (+)
G125752 NA non-coding downstream 46743 25480721 ~ 25480930 (+)
G125787 NA non-coding downstream 80297 25514275 ~ 25514509 (+)
G125797 NA non-coding downstream 87678 25521656 ~ 25521931 (+)
G124451 LOC106578403 other upstream 559930 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 889538 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 1285171 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 1552128 23861576 ~ 23881639 (+)
G125934 NA other downstream 248902 25682880 ~ 25757853 (+)
G126387 LOC105417071 other downstream 615872 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 1192871 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 1360232 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 1423720 26857698 ~ 26861242 (+)

Expression


Co-expression Network