G125856


Basic Information

Item Value
gene id G125856
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25592662 ~ 25592996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145337
TCCTTCAtttatgctgccaaacataccctcgtaaaactgaccatcctaccgatcctccactttggcgatgtcatttacaaaatagcctccaacactctactcaacaaattggatgcagtctatcacagtgccatccattttgttaccaaagccccatatactacccaccactgcgacctgtatgctcttgttggctggccctcgcttcatactcgtcaccaaacccactggctccaggtcatctacaagtctctgctaggtaaagccccaccttatctcagctcactggtcaccatagcagcacccacccatagcacgcgctccagcaggtatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145337 True 335 lncRNA 0.38 1 25592662 25592996

Neighbor

gene id symbol gene type direction distance location
LOC110539045 mrap2 coding upstream 178287 25403433 ~ 25414375 (+)
LOC110534557 LOC106605501 coding upstream 196328 25377221 ~ 25396334 (+)
LOC110534548 LOC106579462 coding upstream 267006 25294643 ~ 25325656 (+)
ascc3 ascc3 coding upstream 301138 25151016 ~ 25291524 (+)
LOC110538989 NA coding upstream 869289 24685282 ~ 24723373 (+)
tsnare1 LOC106605505 coding downstream 238407 25831403 ~ 25974877 (+)
LOC110539113 LOC106605506 coding downstream 506147 26099143 ~ 26113953 (+)
cdk14 LOC106605507 coding downstream 530717 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding downstream 730011 26323007 ~ 26326895 (+)
LOC110539173 LOC106605512 coding downstream 859685 26452681 ~ 26547503 (+)
G125819 NA non-coding upstream 52118 25540181 ~ 25540544 (+)
G125797 NA non-coding upstream 70731 25521656 ~ 25521931 (+)
G125787 NA non-coding upstream 78153 25514275 ~ 25514509 (+)
G125752 NA non-coding upstream 111732 25480721 ~ 25480930 (+)
G125729 NA non-coding upstream 127311 25465102 ~ 25465351 (+)
G125895 NA non-coding downstream 23528 25616524 ~ 25616941 (+)
G125902 NA non-coding downstream 33195 25626191 ~ 25626396 (+)
G125925 NA non-coding downstream 76065 25669061 ~ 25670894 (+)
G125926 NA non-coding downstream 78262 25671258 ~ 25716956 (+)
G125930 LOC106605503 non-coding downstream 81935 25674931 ~ 25732039 (+)
G124451 LOC106578403 other upstream 718828 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1048436 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 1444069 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 1711026 23861576 ~ 23881639 (+)
G125934 NA other downstream 89884 25682880 ~ 25757853 (+)
G126387 LOC105417071 other downstream 456854 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 1033853 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 1201214 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 1264702 26857698 ~ 26861242 (+)

Expression


Co-expression Network